Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.31■□□□□ 0.84
HOXC8P31273 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.31■□□□□ 0.84
HOXC8P31273 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.31■□□□□ 0.84
HOXC8P31273 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.31■□□□□ 0.84
HOXC8P31273 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HOXC8P31273 AL161938.1-201ENST00000569833 2180 ntBASIC20.31■□□□□ 0.84
HOXC8P31273 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC8P31273 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC8P31273 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HOXC8P31273 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.3■□□□□ 0.84
HOXC8P31273 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC8P31273 AFG3L1P-217ENST00000557444 2447 ntBASIC20.3■□□□□ 0.84
HOXC8P31273 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC8P31273 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
HOXC8P31273 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
HOXC8P31273 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.3■□□□□ 0.84
HOXC8P31273 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC8P31273 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC8P31273 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.3■□□□□ 0.84
HOXC8P31273 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HOXC8P31273 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC8P31273 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC8P31273 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC8P31273 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC8P31273 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HOXC8P31273 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HOXC8P31273 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.3■□□□□ 0.84
HOXC8P31273 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HOXC8P31273 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC8P31273 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HOXC8P31273 AC007952.6-201ENST00000573168 2673 ntBASIC20.29■□□□□ 0.84
HOXC8P31273 AC003957.1-201ENST00000625108 2673 ntBASIC20.29■□□□□ 0.84
HOXC8P31273 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC8P31273 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HOXC8P31273 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC8P31273 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HOXC8P31273 MIR149-201ENST00000384879 89 ntBASIC20.29■□□□□ 0.84
HOXC8P31273 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.29■□□□□ 0.84
HOXC8P31273 LINC01711-201ENST00000598340 967 ntBASIC20.29■□□□□ 0.84
HOXC8P31273 AL121912.1-201ENST00000603683 238 ntBASIC20.29■□□□□ 0.84
HOXC8P31273 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.29■□□□□ 0.84
HOXC8P31273 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC8P31273 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC8P31273 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC8P31273 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC8P31273 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HOXC8P31273 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC8P31273 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HOXC8P31273 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HOXC8P31273 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC8P31273 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC8P31273 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXC8P31273 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXC8P31273 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC8P31273 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
HOXC8P31273 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC8P31273 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.28■□□□□ 0.84
HOXC8P31273 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC8P31273 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HOXC8P31273 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.28■□□□□ 0.84
HOXC8P31273 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
HOXC8P31273 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.28■□□□□ 0.84
HOXC8P31273 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXC8P31273 REXO1L6P-202ENST00000619970 1078 ntBASIC20.28■□□□□ 0.84
HOXC8P31273 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
HOXC8P31273 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC8P31273 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXC8P31273 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC8P31273 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC8P31273 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC8P31273 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.28■□□□□ 0.84
HOXC8P31273 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.28■□□□□ 0.84
HOXC8P31273 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HOXC8P31273 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC8P31273 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC8P31273 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
HOXC8P31273 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXC8P31273 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXC8P31273 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC8P31273 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC8P31273 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC8P31273 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC8P31273 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC8P31273 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.27■□□□□ 0.84
HOXC8P31273 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXC8P31273 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.27■□□□□ 0.84
HOXC8P31273 VENTXP7-201ENST00000475503 772 ntBASIC20.27■□□□□ 0.84
HOXC8P31273 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HOXC8P31273 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.27■□□□□ 0.84
HOXC8P31273 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC8P31273 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HOXC8P31273 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.27■□□□□ 0.84
HOXC8P31273 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC8P31273 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC8P31273 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXC8P31273 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
HOXC8P31273 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms