Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.51■□□□□ 0.87
GAP43P17677 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.51■□□□□ 0.87
GAP43P17677 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.51■□□□□ 0.87
GAP43P17677 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.51■□□□□ 0.87
GAP43P17677 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.51■□□□□ 0.87
GAP43P17677 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GAP43P17677 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
GAP43P17677 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.5■□□□□ 0.87
GAP43P17677 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
GAP43P17677 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GAP43P17677 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 AP000523.1-201ENST00000398242 1049 ntBASIC20.5■□□□□ 0.87
GAP43P17677 AC211429.1-201ENST00000415277 523 ntBASIC20.5■□□□□ 0.87
GAP43P17677 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.5■□□□□ 0.87
GAP43P17677 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.5■□□□□ 0.87
GAP43P17677 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.5■□□□□ 0.87
GAP43P17677 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.5■□□□□ 0.87
GAP43P17677 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.5■□□□□ 0.87
GAP43P17677 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
GAP43P17677 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GAP43P17677 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
GAP43P17677 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GAP43P17677 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.49■□□□□ 0.87
GAP43P17677 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.49■□□□□ 0.87
GAP43P17677 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.49■□□□□ 0.87
GAP43P17677 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.49■□□□□ 0.87
GAP43P17677 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.49■□□□□ 0.87
GAP43P17677 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
GAP43P17677 AC104390.1-201ENST00000555663 520 ntBASIC20.49■□□□□ 0.87
GAP43P17677 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.49■□□□□ 0.87
GAP43P17677 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 AC005363.2-201ENST00000618631 242 ntBASIC20.49■□□□□ 0.87
GAP43P17677 AL138966.2-201ENST00000621997 464 ntBASIC20.49■□□□□ 0.87
GAP43P17677 AC141257.4-201ENST00000634557 245 ntBASIC20.49■□□□□ 0.87
GAP43P17677 AC136944.6-201ENST00000634818 245 ntBASIC20.49■□□□□ 0.87
GAP43P17677 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
GAP43P17677 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.49■□□□□ 0.87
GAP43P17677 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
GAP43P17677 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAP43P17677 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
GAP43P17677 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GAP43P17677 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GAP43P17677 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GAP43P17677 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
GAP43P17677 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
GAP43P17677 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
GAP43P17677 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GAP43P17677 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GAP43P17677 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
GAP43P17677 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.48■□□□□ 0.87
GAP43P17677 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.48■□□□□ 0.87
GAP43P17677 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
GAP43P17677 AC113347.1-201ENST00000413321 391 ntBASIC20.48■□□□□ 0.87
GAP43P17677 LIN28AP1-201ENST00000429574 405 ntBASIC20.48■□□□□ 0.87
GAP43P17677 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.48■□□□□ 0.87
GAP43P17677 MIR3180-4-201ENST00000582223 153 ntBASIC20.48■□□□□ 0.87
GAP43P17677 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.48■□□□□ 0.87
GAP43P17677 LINC01023-201ENST00000606054 436 ntBASIC20.48■□□□□ 0.87
GAP43P17677 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GAP43P17677 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms