Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT3P12035 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT3P12035 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT3P12035 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
KRT3P12035 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
KRT3P12035 AC112777.1-201ENST00000540175 1423 ntBASIC19.61■□□□□ 0.73
KRT3P12035 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
KRT3P12035 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.61■□□□□ 0.73
KRT3P12035 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 MIR564-202ENST00000385049 94 ntBASIC19.61■□□□□ 0.73
KRT3P12035 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 AP003041.3-201ENST00000527151 707 ntBASIC19.61■□□□□ 0.73
KRT3P12035 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.61■□□□□ 0.73
KRT3P12035 MIR4674-201ENST00000582457 87 ntBASIC19.61■□□□□ 0.73
KRT3P12035 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.61■□□□□ 0.73
KRT3P12035 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.61■□□□□ 0.73
KRT3P12035 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.61■□□□□ 0.73
KRT3P12035 AC116562.4-202ENST00000641738 218 ntBASIC19.61■□□□□ 0.73
KRT3P12035 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
KRT3P12035 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT3P12035 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT3P12035 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT3P12035 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT3P12035 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.61■□□□□ 0.73
KRT3P12035 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
KRT3P12035 KRT8P45-201ENST00000414328 1447 ntBASIC19.6■□□□□ 0.73
KRT3P12035 AC092338.2-201ENST00000568827 1415 ntBASIC19.6■□□□□ 0.73
KRT3P12035 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT3P12035 AC073592.3-201ENST00000625118 1834 ntBASIC19.6■□□□□ 0.73
KRT3P12035 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
KRT3P12035 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
KRT3P12035 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.6■□□□□ 0.73
KRT3P12035 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
KRT3P12035 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT3P12035 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
KRT3P12035 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
KRT3P12035 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.6■□□□□ 0.73
KRT3P12035 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
KRT3P12035 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.6■□□□□ 0.73
KRT3P12035 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
KRT3P12035 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.6■□□□□ 0.73
KRT3P12035 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.6■□□□□ 0.73
KRT3P12035 NEFHP1-201ENST00000412845 2629 ntBASIC19.6■□□□□ 0.73
KRT3P12035 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
KRT3P12035 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.6■□□□□ 0.73
KRT3P12035 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT3P12035 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
KRT3P12035 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT3P12035 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT3P12035 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT3P12035 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT3P12035 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
KRT3P12035 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRT3P12035 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT3P12035 MMP23A-201ENST00000234610 1017 ntBASIC19.59■□□□□ 0.73
KRT3P12035 TSPY14P-201ENST00000303979 915 ntBASIC19.59■□□□□ 0.73
KRT3P12035 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT3P12035 BX088651.1-201ENST00000540551 451 ntBASIC19.59■□□□□ 0.73
KRT3P12035 MIR3180-5-201ENST00000583743 153 ntBASIC19.59■□□□□ 0.73
KRT3P12035 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.59■□□□□ 0.73
KRT3P12035 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT3P12035 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
KRT3P12035 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT3P12035 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT3P12035 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
KRT3P12035 KRT8P9-201ENST00000558927 1449 ntBASIC19.59■□□□□ 0.73
KRT3P12035 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT3P12035 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRT3P12035 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.59■□□□□ 0.73
KRT3P12035 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms