Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PF4V1P10720 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PF4V1P10720 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.77□□□□□ -0.05
PF4V1P10720 AP000523.1-201ENST00000398242 1049 ntBASIC14.77□□□□□ -0.05
PF4V1P10720 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.77□□□□□ -0.05
PF4V1P10720 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PF4V1P10720 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.77□□□□□ -0.05
PF4V1P10720 AL138966.2-201ENST00000621997 464 ntBASIC14.77□□□□□ -0.05
PF4V1P10720 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PF4V1P10720 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
PF4V1P10720 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PF4V1P10720 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PF4V1P10720 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.77□□□□□ -0.05
PF4V1P10720 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PF4V1P10720 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PF4V1P10720 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PF4V1P10720 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
PF4V1P10720 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PF4V1P10720 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
PF4V1P10720 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.76□□□□□ -0.05
PF4V1P10720 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
PF4V1P10720 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.76□□□□□ -0.05
PF4V1P10720 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 UPK3BP1-201ENST00000428678 509 ntBASIC14.76□□□□□ -0.05
PF4V1P10720 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.76□□□□□ -0.05
PF4V1P10720 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.76□□□□□ -0.05
PF4V1P10720 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.76□□□□□ -0.05
PF4V1P10720 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.76□□□□□ -0.05
PF4V1P10720 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.76□□□□□ -0.05
PF4V1P10720 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.76□□□□□ -0.05
PF4V1P10720 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.76□□□□□ -0.05
PF4V1P10720 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.76□□□□□ -0.05
PF4V1P10720 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.76□□□□□ -0.05
PF4V1P10720 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PF4V1P10720 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PF4V1P10720 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PF4V1P10720 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.76□□□□□ -0.05
PF4V1P10720 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PF4V1P10720 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
PF4V1P10720 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PF4V1P10720 AL161938.1-201ENST00000569833 2180 ntBASIC14.75□□□□□ -0.05
PF4V1P10720 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PF4V1P10720 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PF4V1P10720 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PF4V1P10720 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.75□□□□□ -0.05
PF4V1P10720 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.75□□□□□ -0.05
PF4V1P10720 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.75□□□□□ -0.05
PF4V1P10720 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PF4V1P10720 FAM8A6P-201ENST00000407496 1135 ntBASIC14.75□□□□□ -0.05
PF4V1P10720 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.75□□□□□ -0.05
PF4V1P10720 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.75□□□□□ -0.05
PF4V1P10720 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.75□□□□□ -0.05
PF4V1P10720 HOMER2P1-201ENST00000455653 964 ntBASIC14.75□□□□□ -0.05
PF4V1P10720 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.75□□□□□ -0.05
PF4V1P10720 AP003041.3-201ENST00000527151 707 ntBASIC14.75□□□□□ -0.05
PF4V1P10720 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.75□□□□□ -0.05
PF4V1P10720 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.75□□□□□ -0.05
PF4V1P10720 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.75□□□□□ -0.05
PF4V1P10720 AL023803.3-201ENST00000615559 522 ntBASIC14.75□□□□□ -0.05
PF4V1P10720 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.75□□□□□ -0.05
PF4V1P10720 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
PF4V1P10720 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PF4V1P10720 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PF4V1P10720 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.75□□□□□ -0.05
PF4V1P10720 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PF4V1P10720 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
PF4V1P10720 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PF4V1P10720 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PF4V1P10720 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PF4V1P10720 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PF4V1P10720 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PF4V1P10720 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.75□□□□□ -0.05
PF4V1P10720 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PF4V1P10720 KRT8P3-201ENST00000519669 1449 ntBASIC14.75□□□□□ -0.05
PF4V1P10720 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.74□□□□□ -0.05
PF4V1P10720 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.74□□□□□ -0.05
PF4V1P10720 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.74□□□□□ -0.05
PF4V1P10720 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.74□□□□□ -0.05
PF4V1P10720 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PF4V1P10720 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms