Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CYP3A4P08684 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CYP3A4P08684 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CYP3A4P08684 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CYP3A4P08684 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CYP3A4P08684 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CYP3A4P08684 MIR662-201ENST00000384847 95 ntBASIC20.91■□□□□ 0.94
CYP3A4P08684 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CYP3A4P08684 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.91■□□□□ 0.94
CYP3A4P08684 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CYP3A4P08684 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CYP3A4P08684 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.91■□□□□ 0.94
CYP3A4P08684 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.91■□□□□ 0.94
CYP3A4P08684 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CYP3A4P08684 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CYP3A4P08684 AC005332.1-201ENST00000577698 1310 ntBASIC20.91■□□□□ 0.94
CYP3A4P08684 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CYP3A4P08684 AC116407.4-201ENST00000623319 1061 ntBASIC20.91■□□□□ 0.94
CYP3A4P08684 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CYP3A4P08684 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP3A4P08684 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.9■□□□□ 0.94
CYP3A4P08684 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CYP3A4P08684 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CYP3A4P08684 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP3A4P08684 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CYP3A4P08684 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
CYP3A4P08684 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.9■□□□□ 0.94
CYP3A4P08684 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CYP3A4P08684 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.9■□□□□ 0.94
CYP3A4P08684 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP3A4P08684 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP3A4P08684 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP3A4P08684 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CYP3A4P08684 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.9■□□□□ 0.94
CYP3A4P08684 VENTXP5-201ENST00000523979 775 ntBASIC20.9■□□□□ 0.94
CYP3A4P08684 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.9■□□□□ 0.94
CYP3A4P08684 AL358472.4-201ENST00000633140 710 ntBASIC20.9■□□□□ 0.94
CYP3A4P08684 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.9■□□□□ 0.94
CYP3A4P08684 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.9■□□□□ 0.94
CYP3A4P08684 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP3A4P08684 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP3A4P08684 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CYP3A4P08684 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP3A4P08684 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.9■□□□□ 0.94
CYP3A4P08684 TNXA-203ENST00000507684 2038 ntBASIC20.9■□□□□ 0.94
CYP3A4P08684 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.9■□□□□ 0.94
CYP3A4P08684 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP3A4P08684 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CYP3A4P08684 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.9■□□□□ 0.94
CYP3A4P08684 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CYP3A4P08684 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.94
CYP3A4P08684 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.89■□□□□ 0.94
CYP3A4P08684 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CYP3A4P08684 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CYP3A4P08684 AC009102.3-201ENST00000623118 1491 ntBASIC20.89■□□□□ 0.94
CYP3A4P08684 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CYP3A4P08684 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CYP3A4P08684 SDHAP2-201ENST00000455183 2001 ntBASIC20.89■□□□□ 0.93
CYP3A4P08684 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CYP3A4P08684 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CYP3A4P08684 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.89■□□□□ 0.93
CYP3A4P08684 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CYP3A4P08684 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CYP3A4P08684 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CYP3A4P08684 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CYP3A4P08684 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CYP3A4P08684 PCED1CP-201ENST00000419887 785 ntBASIC20.89■□□□□ 0.93
CYP3A4P08684 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CYP3A4P08684 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.89■□□□□ 0.93
CYP3A4P08684 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
CYP3A4P08684 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CYP3A4P08684 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CYP3A4P08684 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CYP3A4P08684 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CYP3A4P08684 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.89■□□□□ 0.93
CYP3A4P08684 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.88■□□□□ 0.93
CYP3A4P08684 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.88■□□□□ 0.93
CYP3A4P08684 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CYP3A4P08684 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.88■□□□□ 0.93
CYP3A4P08684 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 AC091076.1-201ENST00000610741 619 ntBASIC20.88■□□□□ 0.93
CYP3A4P08684 AP000550.4-202ENST00000639755 178 ntBASIC20.88■□□□□ 0.93
CYP3A4P08684 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CYP3A4P08684 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CYP3A4P08684 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.87■□□□□ 0.93
CYP3A4P08684 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.87■□□□□ 0.93
CYP3A4P08684 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CYP3A4P08684 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms