Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHOP08100 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RHOP08100 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHOP08100 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHOP08100 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RHOP08100 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHOP08100 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.27■□□□□ 0.68
RHOP08100 RN7SL606P-201ENST00000472779 293 ntBASIC19.27■□□□□ 0.68
RHOP08100 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.27■□□□□ 0.68
RHOP08100 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.27■□□□□ 0.68
RHOP08100 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.27■□□□□ 0.68
RHOP08100 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.27■□□□□ 0.68
RHOP08100 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHOP08100 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RHOP08100 AL032819.2-201ENST00000624543 2162 ntBASIC19.27■□□□□ 0.68
RHOP08100 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.27■□□□□ 0.68
RHOP08100 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
RHOP08100 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.27■□□□□ 0.67
RHOP08100 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RHOP08100 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RHOP08100 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.27■□□□□ 0.67
RHOP08100 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.27■□□□□ 0.67
RHOP08100 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RHOP08100 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.27■□□□□ 0.67
RHOP08100 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RHOP08100 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.26■□□□□ 0.67
RHOP08100 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.26■□□□□ 0.67
RHOP08100 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.26■□□□□ 0.67
RHOP08100 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 IGHV3-47-201ENST00000425060 335 ntBASIC19.26■□□□□ 0.67
RHOP08100 AP000347.1-202ENST00000435868 847 ntBASIC19.26■□□□□ 0.67
RHOP08100 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.26■□□□□ 0.67
RHOP08100 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
RHOP08100 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RHOP08100 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 AL353692.3-201ENST00000407031 1396 ntBASIC19.26■□□□□ 0.67
RHOP08100 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 KRT89P-201ENST00000620027 1478 ntBASIC19.26■□□□□ 0.67
RHOP08100 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RHOP08100 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RHOP08100 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.26■□□□□ 0.67
RHOP08100 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.26■□□□□ 0.67
RHOP08100 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RHOP08100 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.25■□□□□ 0.67
RHOP08100 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
RHOP08100 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RHOP08100 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.25■□□□□ 0.67
RHOP08100 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.25■□□□□ 0.67
RHOP08100 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RHOP08100 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.25■□□□□ 0.67
RHOP08100 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.25■□□□□ 0.67
RHOP08100 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RHOP08100 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.25■□□□□ 0.67
RHOP08100 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.25■□□□□ 0.67
RHOP08100 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.25■□□□□ 0.67
RHOP08100 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RHOP08100 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RHOP08100 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.24■□□□□ 0.67
RHOP08100 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.24■□□□□ 0.67
RHOP08100 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.24■□□□□ 0.67
RHOP08100 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.24■□□□□ 0.67
RHOP08100 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.24■□□□□ 0.67
RHOP08100 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.24■□□□□ 0.67
RHOP08100 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.24■□□□□ 0.67
RHOP08100 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.24■□□□□ 0.67
RHOP08100 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.24■□□□□ 0.67
RHOP08100 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RHOP08100 AL353801.3-201ENST00000609898 542 ntBASIC19.24■□□□□ 0.67
RHOP08100 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.24■□□□□ 0.67
RHOP08100 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms