Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
THBS1P07996 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.14■□□□□ 0.34
THBS1P07996 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
THBS1P07996 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
THBS1P07996 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS1P07996 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS1P07996 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS1P07996 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
THBS1P07996 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS1P07996 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.14■□□□□ 0.33
THBS1P07996 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
THBS1P07996 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
THBS1P07996 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS1P07996 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
THBS1P07996 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.14■□□□□ 0.33
THBS1P07996 AC211429.1-201ENST00000415277 523 ntBASIC17.14■□□□□ 0.33
THBS1P07996 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.14■□□□□ 0.33
THBS1P07996 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.14■□□□□ 0.33
THBS1P07996 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
THBS1P07996 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
THBS1P07996 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.14■□□□□ 0.33
THBS1P07996 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.14■□□□□ 0.33
THBS1P07996 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
THBS1P07996 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.14■□□□□ 0.33
THBS1P07996 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
THBS1P07996 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.14■□□□□ 0.33
THBS1P07996 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.13■□□□□ 0.33
THBS1P07996 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.13■□□□□ 0.33
THBS1P07996 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
THBS1P07996 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
THBS1P07996 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 CRYGFP-201ENST00000418459 633 ntBASIC17.13■□□□□ 0.33
THBS1P07996 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 ECEL1P3-201ENST00000427961 737 ntBASIC17.13■□□□□ 0.33
THBS1P07996 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.13■□□□□ 0.33
THBS1P07996 BX088651.1-201ENST00000540551 451 ntBASIC17.13■□□□□ 0.33
THBS1P07996 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.13■□□□□ 0.33
THBS1P07996 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
THBS1P07996 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 AC034236.2-201ENST00000606662 1610 ntBASIC17.13■□□□□ 0.33
THBS1P07996 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
THBS1P07996 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.13■□□□□ 0.33
THBS1P07996 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.13■□□□□ 0.33
THBS1P07996 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
THBS1P07996 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
THBS1P07996 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.12■□□□□ 0.33
THBS1P07996 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.12■□□□□ 0.33
THBS1P07996 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.12■□□□□ 0.33
THBS1P07996 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
THBS1P07996 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.12■□□□□ 0.33
THBS1P07996 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.12■□□□□ 0.33
THBS1P07996 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.12■□□□□ 0.33
THBS1P07996 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.12■□□□□ 0.33
THBS1P07996 AP003071.4-201ENST00000562276 1284 ntBASIC17.12■□□□□ 0.33
THBS1P07996 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.12■□□□□ 0.33
THBS1P07996 KRT17P2-201ENST00000300992 1314 ntBASIC17.12■□□□□ 0.33
THBS1P07996 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
THBS1P07996 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
THBS1P07996 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.12■□□□□ 0.33
THBS1P07996 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
THBS1P07996 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
THBS1P07996 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS1P07996 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.12■□□□□ 0.33
THBS1P07996 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
THBS1P07996 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
THBS1P07996 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.11■□□□□ 0.33
THBS1P07996 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
THBS1P07996 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.11■□□□□ 0.33
THBS1P07996 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
THBS1P07996 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THBS1P07996 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms