Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC1P07992 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC1P07992 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC1P07992 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ERCC1P07992 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC1P07992 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.52■□□□□ 0.24
ERCC1P07992 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.52■□□□□ 0.24
ERCC1P07992 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.52■□□□□ 0.24
ERCC1P07992 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.52■□□□□ 0.24
ERCC1P07992 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.52■□□□□ 0.24
ERCC1P07992 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC1P07992 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC1P07992 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC1P07992 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.52■□□□□ 0.23
ERCC1P07992 PKD1P1-201ENST00000458669 6805 ntBASIC16.52■□□□□ 0.23
ERCC1P07992 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC1P07992 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.52■□□□□ 0.23
ERCC1P07992 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC1P07992 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
ERCC1P07992 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.52■□□□□ 0.23
ERCC1P07992 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.52■□□□□ 0.23
ERCC1P07992 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC1P07992 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 AL512353.2-201ENST00000448759 1962 ntBASIC16.51■□□□□ 0.23
ERCC1P07992 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.51■□□□□ 0.23
ERCC1P07992 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ERCC1P07992 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ERCC1P07992 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.51■□□□□ 0.23
ERCC1P07992 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ERCC1P07992 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
ERCC1P07992 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.51■□□□□ 0.23
ERCC1P07992 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.51■□□□□ 0.23
ERCC1P07992 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ERCC1P07992 FAM210CP-201ENST00000445714 574 ntBASIC16.51■□□□□ 0.23
ERCC1P07992 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.51■□□□□ 0.23
ERCC1P07992 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.51■□□□□ 0.23
ERCC1P07992 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.51■□□□□ 0.23
ERCC1P07992 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.51■□□□□ 0.23
ERCC1P07992 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
ERCC1P07992 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.51■□□□□ 0.23
ERCC1P07992 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ERCC1P07992 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC1P07992 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ERCC1P07992 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 KRT18P22-201ENST00000402024 1347 ntBASIC16.5■□□□□ 0.23
ERCC1P07992 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.5■□□□□ 0.23
ERCC1P07992 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.5■□□□□ 0.23
ERCC1P07992 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.5■□□□□ 0.23
ERCC1P07992 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 TSPY15P-201ENST00000457163 923 ntBASIC16.5■□□□□ 0.23
ERCC1P07992 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
ERCC1P07992 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.5■□□□□ 0.23
ERCC1P07992 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ERCC1P07992 FITM1-202ENST00000559294 800 ntBASIC16.5■□□□□ 0.23
ERCC1P07992 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.5■□□□□ 0.23
ERCC1P07992 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.5■□□□□ 0.23
ERCC1P07992 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.5■□□□□ 0.23
ERCC1P07992 AC097493.4-201ENST00000641197 219 ntBASIC16.5■□□□□ 0.23
ERCC1P07992 AC083906.6-201ENST00000641366 219 ntBASIC16.5■□□□□ 0.23
ERCC1P07992 AC104581.1-202ENST00000635932 2618 ntBASIC16.5■□□□□ 0.23
ERCC1P07992 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.5■□□□□ 0.23
ERCC1P07992 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.5■□□□□ 0.23
ERCC1P07992 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.5■□□□□ 0.23
ERCC1P07992 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ERCC1P07992 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ERCC1P07992 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms