Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.75■□□□□ 0.59
RETP07949 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.75■□□□□ 0.59
RETP07949 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RETP07949 AC104819.1-201ENST00000504587 486 ntBASIC18.75■□□□□ 0.59
RETP07949 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.75■□□□□ 0.59
RETP07949 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.75■□□□□ 0.59
RETP07949 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RETP07949 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RETP07949 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.75■□□□□ 0.59
RETP07949 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RETP07949 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RETP07949 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.75■□□□□ 0.59
RETP07949 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RETP07949 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RETP07949 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.74■□□□□ 0.59
RETP07949 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RETP07949 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.74■□□□□ 0.59
RETP07949 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RETP07949 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RETP07949 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.74■□□□□ 0.59
RETP07949 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.74■□□□□ 0.59
RETP07949 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.74■□□□□ 0.59
RETP07949 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.74■□□□□ 0.59
RETP07949 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.74■□□□□ 0.59
RETP07949 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.74■□□□□ 0.59
RETP07949 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
RETP07949 AL353801.3-201ENST00000609898 542 ntBASIC18.74■□□□□ 0.59
RETP07949 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.74■□□□□ 0.59
RETP07949 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RETP07949 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.74■□□□□ 0.59
RETP07949 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RETP07949 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.73■□□□□ 0.59
RETP07949 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
RETP07949 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RETP07949 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RETP07949 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.73■□□□□ 0.59
RETP07949 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RETP07949 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RETP07949 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RETP07949 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RETP07949 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RETP07949 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RETP07949 KRT16P4-201ENST00000453883 522 ntBASIC18.73■□□□□ 0.59
RETP07949 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.73■□□□□ 0.59
RETP07949 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.73■□□□□ 0.59
RETP07949 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.73■□□□□ 0.59
RETP07949 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.73■□□□□ 0.59
RETP07949 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RETP07949 AC079602.3-201ENST00000623931 403 ntBASIC18.73■□□□□ 0.59
RETP07949 AF228730.7-201ENST00000641842 219 ntBASIC18.73■□□□□ 0.59
RETP07949 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RETP07949 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.73■□□□□ 0.59
RETP07949 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RETP07949 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RETP07949 AC004408.2-201ENST00000623613 2777 ntBASIC18.73■□□□□ 0.59
RETP07949 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RETP07949 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RETP07949 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.73■□□□□ 0.59
RETP07949 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.73■□□□□ 0.59
RETP07949 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 AC009237.14-201ENST00000609975 1594 ntBASIC18.72■□□□□ 0.59
RETP07949 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RETP07949 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.72■□□□□ 0.59
RETP07949 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.72■□□□□ 0.59
RETP07949 MIR574-201ENST00000385209 96 ntBASIC18.72■□□□□ 0.59
RETP07949 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RETP07949 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RETP07949 AL136038.4-201ENST00000603606 1261 ntBASIC18.72■□□□□ 0.59
RETP07949 AC064862.7-201ENST00000604520 867 ntBASIC18.72■□□□□ 0.59
RETP07949 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms