Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.4■□□□□ 0.38
PDGFAP04085 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFAP04085 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.4■□□□□ 0.38
PDGFAP04085 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFAP04085 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PDGFAP04085 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.39■□□□□ 0.38
PDGFAP04085 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFAP04085 GPAT2P1-201ENST00000444924 1672 ntBASIC17.39■□□□□ 0.37
PDGFAP04085 NOC2LP1-202ENST00000452600 2235 ntBASIC17.39■□□□□ 0.37
PDGFAP04085 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFAP04085 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.39■□□□□ 0.37
PDGFAP04085 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.39■□□□□ 0.37
PDGFAP04085 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PDGFAP04085 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.39■□□□□ 0.37
PDGFAP04085 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFAP04085 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.39■□□□□ 0.37
PDGFAP04085 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFAP04085 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFAP04085 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFAP04085 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFAP04085 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.39■□□□□ 0.37
PDGFAP04085 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.39■□□□□ 0.37
PDGFAP04085 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.39■□□□□ 0.37
PDGFAP04085 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PDGFAP04085 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.38■□□□□ 0.37
PDGFAP04085 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 AC104417.2-201ENST00000562989 1793 ntBASIC17.38■□□□□ 0.37
PDGFAP04085 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.38■□□□□ 0.37
PDGFAP04085 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.38■□□□□ 0.37
PDGFAP04085 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PDGFAP04085 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PDGFAP04085 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.38■□□□□ 0.37
PDGFAP04085 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.38■□□□□ 0.37
PDGFAP04085 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.38■□□□□ 0.37
PDGFAP04085 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PDGFAP04085 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PDGFAP04085 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.38■□□□□ 0.37
PDGFAP04085 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PDGFAP04085 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.38■□□□□ 0.37
PDGFAP04085 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.38■□□□□ 0.37
PDGFAP04085 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFAP04085 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PDGFAP04085 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.37■□□□□ 0.37
PDGFAP04085 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.37■□□□□ 0.37
PDGFAP04085 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PDGFAP04085 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 AC034232.1-201ENST00000506026 1064 ntBASIC17.37■□□□□ 0.37
PDGFAP04085 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.37■□□□□ 0.37
PDGFAP04085 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.37■□□□□ 0.37
PDGFAP04085 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.37■□□□□ 0.37
PDGFAP04085 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.37■□□□□ 0.37
PDGFAP04085 AL121672.3-201ENST00000608644 468 ntBASIC17.37■□□□□ 0.37
PDGFAP04085 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.37■□□□□ 0.37
PDGFAP04085 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.37■□□□□ 0.37
PDGFAP04085 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PDGFAP04085 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PDGFAP04085 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFAP04085 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PDGFAP04085 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.36■□□□□ 0.37
PDGFAP04085 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.36■□□□□ 0.37
PDGFAP04085 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms