Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 AC018470.1-201ENST00000624790 3129 ntBASIC16.74■□□□□ 0.27
HLA-DQA2P01906 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA2P01906 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 KRT8P11-201ENST00000409686 1436 ntBASIC16.73■□□□□ 0.27
HLA-DQA2P01906 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 AL353807.1-201ENST00000427475 662 ntBASIC16.73■□□□□ 0.27
HLA-DQA2P01906 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA2P01906 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 RCC2P6-201ENST00000526625 1557 ntBASIC16.72■□□□□ 0.27
HLA-DQA2P01906 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 AC004980.1-204ENST00000429707 299 ntBASIC16.72■□□□□ 0.27
HLA-DQA2P01906 KSR1P1-201ENST00000446298 240 ntBASIC16.72■□□□□ 0.27
HLA-DQA2P01906 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 RPS2P4-201ENST00000476944 856 ntBASIC16.72■□□□□ 0.27
HLA-DQA2P01906 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 PRSS44-201ENST00000515154 1146 ntBASIC16.72■□□□□ 0.27
HLA-DQA2P01906 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-DQA2P01906 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms