Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 AC073314.1-201ENST00000568729 2216 ntBASIC18.68■□□□□ 0.58
PDGFBP01127 AC034236.2-201ENST00000606662 1610 ntBASIC18.67■□□□□ 0.58
PDGFBP01127 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFBP01127 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFBP01127 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PDGFBP01127 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFBP01127 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFBP01127 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDGFBP01127 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.67■□□□□ 0.58
PDGFBP01127 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFBP01127 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PDGFBP01127 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.67■□□□□ 0.58
PDGFBP01127 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.67■□□□□ 0.58
PDGFBP01127 AC211486.1-202ENST00000416371 468 ntBASIC18.67■□□□□ 0.58
PDGFBP01127 AC004832.2-201ENST00000426397 482 ntBASIC18.67■□□□□ 0.58
PDGFBP01127 AC211476.1-201ENST00000503899 468 ntBASIC18.67■□□□□ 0.58
PDGFBP01127 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.67■□□□□ 0.58
PDGFBP01127 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFBP01127 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDGFBP01127 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFBP01127 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFBP01127 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFBP01127 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.67■□□□□ 0.58
PDGFBP01127 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDGFBP01127 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDGFBP01127 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PDGFBP01127 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFBP01127 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.66■□□□□ 0.58
PDGFBP01127 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.66■□□□□ 0.58
PDGFBP01127 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFBP01127 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PDGFBP01127 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFBP01127 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.66■□□□□ 0.58
PDGFBP01127 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFBP01127 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFBP01127 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFBP01127 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFBP01127 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.66■□□□□ 0.58
PDGFBP01127 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.66■□□□□ 0.58
PDGFBP01127 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PDGFBP01127 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFBP01127 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.66■□□□□ 0.58
PDGFBP01127 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.66■□□□□ 0.58
PDGFBP01127 HTR5BP-201ENST00000430851 1154 ntBASIC18.66■□□□□ 0.58
PDGFBP01127 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDGFBP01127 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.66■□□□□ 0.58
PDGFBP01127 OR7E14P-202ENST00000530490 1290 ntBASIC18.66■□□□□ 0.58
PDGFBP01127 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.66■□□□□ 0.58
PDGFBP01127 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
PDGFBP01127 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.66■□□□□ 0.58
PDGFBP01127 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.66■□□□□ 0.58
PDGFBP01127 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.66■□□□□ 0.58
PDGFBP01127 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDGFBP01127 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
PDGFBP01127 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.66■□□□□ 0.58
PDGFBP01127 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.65■□□□□ 0.58
PDGFBP01127 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.65■□□□□ 0.58
PDGFBP01127 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.65■□□□□ 0.58
PDGFBP01127 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.65■□□□□ 0.58
PDGFBP01127 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDGFBP01127 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.65■□□□□ 0.58
PDGFBP01127 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
PDGFBP01127 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.65■□□□□ 0.58
PDGFBP01127 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 RNA5SP416-201ENST00000516838 111 ntBASIC18.65■□□□□ 0.58
PDGFBP01127 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.65■□□□□ 0.58
PDGFBP01127 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDGFBP01127 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.65■□□□□ 0.58
PDGFBP01127 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.65■□□□□ 0.58
PDGFBP01127 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PDGFBP01127 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.65■□□□□ 0.58
PDGFBP01127 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.65■□□□□ 0.58
PDGFBP01127 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.65■□□□□ 0.58
PDGFBP01127 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDGFBP01127 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
PDGFBP01127 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDGFBP01127 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDGFBP01127 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDGFBP01127 CLDN5-201ENST00000403084 2357 ntBASIC18.64■□□□□ 0.58
PDGFBP01127 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
PDGFBP01127 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.64■□□□□ 0.58
PDGFBP01127 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.64■□□□□ 0.57
PDGFBP01127 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms