Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD3O95983 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD3O95983 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.35■■□□□ 1.01
MBD3O95983 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.35■■□□□ 1.01
MBD3O95983 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.35■■□□□ 1.01
MBD3O95983 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
MBD3O95983 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.35■■□□□ 1.01
MBD3O95983 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.35■■□□□ 1.01
MBD3O95983 HLA-B-256ENST00000639848 1089 ntBASIC21.35■■□□□ 1.01
MBD3O95983 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
MBD3O95983 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.35■■□□□ 1.01
MBD3O95983 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
MBD3O95983 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD3O95983 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
MBD3O95983 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MBD3O95983 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MBD3O95983 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
MBD3O95983 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.34■■□□□ 1.01
MBD3O95983 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MBD3O95983 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.34■■□□□ 1.01
MBD3O95983 AC004911.1-201ENST00000416316 871 ntBASIC21.34■■□□□ 1.01
MBD3O95983 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MBD3O95983 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.34■■□□□ 1.01
MBD3O95983 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.34■■□□□ 1.01
MBD3O95983 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.34■■□□□ 1.01
MBD3O95983 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.34■■□□□ 1.01
MBD3O95983 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MBD3O95983 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.34■■□□□ 1.01
MBD3O95983 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MBD3O95983 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MBD3O95983 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MBD3O95983 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
MBD3O95983 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MBD3O95983 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3O95983 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.33■■□□□ 1.01
MBD3O95983 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.33■■□□□ 1.01
MBD3O95983 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3O95983 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
MBD3O95983 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3O95983 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3O95983 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
MBD3O95983 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3O95983 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.33■■□□□ 1.01
MBD3O95983 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3O95983 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3O95983 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3O95983 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
MBD3O95983 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3O95983 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.33■■□□□ 1.01
MBD3O95983 AC091874.3-201ENST00000512672 1195 ntBASIC21.33■■□□□ 1.01
MBD3O95983 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.33■■□□□ 1.01
MBD3O95983 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.33■■□□□ 1.01
MBD3O95983 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3O95983 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3O95983 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.33■■□□□ 1
MBD3O95983 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1
MBD3O95983 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
MBD3O95983 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
MBD3O95983 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.33■■□□□ 1
MBD3O95983 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MBD3O95983 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.32■■□□□ 1
MBD3O95983 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.32■■□□□ 1
MBD3O95983 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
MBD3O95983 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.32■■□□□ 1
MBD3O95983 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
MBD3O95983 MIPEPP3-201ENST00000412105 444 ntBASIC21.32■■□□□ 1
MBD3O95983 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.32■■□□□ 1
MBD3O95983 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.32■■□□□ 1
MBD3O95983 AL121832.2-201ENST00000610979 668 ntBASIC21.32■■□□□ 1
MBD3O95983 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.32■■□□□ 1
MBD3O95983 AC092118.2-201ENST00000613495 667 ntBASIC21.32■■□□□ 1
MBD3O95983 AL050303.2-201ENST00000619798 666 ntBASIC21.32■■□□□ 1
MBD3O95983 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3O95983 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.32■■□□□ 1
MBD3O95983 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MBD3O95983 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
MBD3O95983 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MBD3O95983 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MBD3O95983 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MBD3O95983 KRT8P3-201ENST00000519669 1449 ntBASIC21.31■■□□□ 1
MBD3O95983 OR6D1P-202ENST00000641007 5290 ntBASIC21.31■■□□□ 1
MBD3O95983 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MBD3O95983 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
MBD3O95983 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MBD3O95983 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.31■■□□□ 1
MBD3O95983 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms