Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRUB2O95900 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.51■□□□□ 0.71
TRUB2O95900 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.51■□□□□ 0.71
TRUB2O95900 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRUB2O95900 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
TRUB2O95900 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRUB2O95900 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.5■□□□□ 0.71
TRUB2O95900 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.5■□□□□ 0.71
TRUB2O95900 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.5■□□□□ 0.71
TRUB2O95900 AC126763.1-201ENST00000552015 2118 ntBASIC19.5■□□□□ 0.71
TRUB2O95900 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.5■□□□□ 0.71
TRUB2O95900 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.5■□□□□ 0.71
TRUB2O95900 AC141257.4-201ENST00000634557 245 ntBASIC19.5■□□□□ 0.71
TRUB2O95900 AC136944.6-201ENST00000634818 245 ntBASIC19.5■□□□□ 0.71
TRUB2O95900 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRUB2O95900 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
TRUB2O95900 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.5■□□□□ 0.71
TRUB2O95900 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
TRUB2O95900 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRUB2O95900 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRUB2O95900 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.49■□□□□ 0.71
TRUB2O95900 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.49■□□□□ 0.71
TRUB2O95900 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB2O95900 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB2O95900 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRUB2O95900 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB2O95900 AC009947.2-201ENST00000444014 672 ntBASIC19.49■□□□□ 0.71
TRUB2O95900 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.49■□□□□ 0.71
TRUB2O95900 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRUB2O95900 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.49■□□□□ 0.71
TRUB2O95900 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.49■□□□□ 0.71
TRUB2O95900 AC092865.7-201ENST00000641832 219 ntBASIC19.49■□□□□ 0.71
TRUB2O95900 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRUB2O95900 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB2O95900 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB2O95900 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB2O95900 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB2O95900 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
TRUB2O95900 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB2O95900 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB2O95900 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB2O95900 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB2O95900 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRUB2O95900 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
TRUB2O95900 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRUB2O95900 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.48■□□□□ 0.71
TRUB2O95900 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.48■□□□□ 0.71
TRUB2O95900 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.48■□□□□ 0.71
TRUB2O95900 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
TRUB2O95900 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 MIR564-202ENST00000385049 94 ntBASIC19.48■□□□□ 0.71
TRUB2O95900 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
TRUB2O95900 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.48■□□□□ 0.71
TRUB2O95900 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.48■□□□□ 0.71
TRUB2O95900 KRT18P21-201ENST00000515767 1272 ntBASIC19.48■□□□□ 0.71
TRUB2O95900 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.48■□□□□ 0.71
TRUB2O95900 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.48■□□□□ 0.71
TRUB2O95900 RN7SL850P-201ENST00000579959 291 ntBASIC19.48■□□□□ 0.71
TRUB2O95900 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
TRUB2O95900 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.48■□□□□ 0.71
TRUB2O95900 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRUB2O95900 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.48■□□□□ 0.71
TRUB2O95900 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRUB2O95900 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.48■□□□□ 0.71
TRUB2O95900 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
TRUB2O95900 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRUB2O95900 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRUB2O95900 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB2O95900 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRUB2O95900 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRUB2O95900 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRUB2O95900 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms