Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.58■□□□□ 0.08
ABCA1O95477 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.58■□□□□ 0.08
ABCA1O95477 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.58■□□□□ 0.08
ABCA1O95477 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.57■□□□□ 0.08
ABCA1O95477 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 TSPY22P-201ENST00000427496 604 ntBASIC15.57■□□□□ 0.08
ABCA1O95477 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.57■□□□□ 0.08
ABCA1O95477 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
ABCA1O95477 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.57■□□□□ 0.08
ABCA1O95477 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.57■□□□□ 0.08
ABCA1O95477 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ABCA1O95477 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
ABCA1O95477 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.57■□□□□ 0.08
ABCA1O95477 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.57■□□□□ 0.08
ABCA1O95477 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
ABCA1O95477 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.57■□□□□ 0.08
ABCA1O95477 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
ABCA1O95477 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.57■□□□□ 0.08
ABCA1O95477 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.57■□□□□ 0.08
ABCA1O95477 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.57■□□□□ 0.08
ABCA1O95477 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.57■□□□□ 0.08
ABCA1O95477 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
ABCA1O95477 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.57■□□□□ 0.08
ABCA1O95477 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ABCA1O95477 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ABCA1O95477 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.56■□□□□ 0.08
ABCA1O95477 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ABCA1O95477 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.56■□□□□ 0.08
ABCA1O95477 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 AC120114.3-201ENST00000611923 658 ntBASIC15.56■□□□□ 0.08
ABCA1O95477 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.56■□□□□ 0.08
ABCA1O95477 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ABCA1O95477 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.56■□□□□ 0.08
ABCA1O95477 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ABCA1O95477 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.56■□□□□ 0.08
ABCA1O95477 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.56■□□□□ 0.08
ABCA1O95477 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.56■□□□□ 0.08
ABCA1O95477 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
ABCA1O95477 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ABCA1O95477 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
ABCA1O95477 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.56■□□□□ 0.08
ABCA1O95477 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.56■□□□□ 0.08
ABCA1O95477 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ABCA1O95477 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ABCA1O95477 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.55■□□□□ 0.08
ABCA1O95477 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
ABCA1O95477 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ABCA1O95477 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
ABCA1O95477 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ABCA1O95477 TSPY12P-201ENST00000421279 868 ntBASIC15.55■□□□□ 0.08
ABCA1O95477 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.55■□□□□ 0.08
ABCA1O95477 TSSC2-201ENST00000450217 709 ntBASIC15.55■□□□□ 0.08
ABCA1O95477 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.55■□□□□ 0.08
ABCA1O95477 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.55■□□□□ 0.08
ABCA1O95477 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms