Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
UBL3O95164 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.72■□□□□ 0.27
UBL3O95164 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UBL3O95164 AL512353.2-201ENST00000448759 1962 ntBASIC16.72■□□□□ 0.27
UBL3O95164 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UBL3O95164 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.72■□□□□ 0.27
UBL3O95164 AC011506.1-201ENST00000474329 610 ntBASIC16.72■□□□□ 0.27
UBL3O95164 PRSS44-201ENST00000515154 1146 ntBASIC16.72■□□□□ 0.27
UBL3O95164 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.72■□□□□ 0.27
UBL3O95164 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.72■□□□□ 0.27
UBL3O95164 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.72■□□□□ 0.27
UBL3O95164 REXO1L10P-201ENST00000615707 1290 ntBASIC16.72■□□□□ 0.27
UBL3O95164 REXO1L12P-201ENST00000622156 912 ntBASIC16.72■□□□□ 0.27
UBL3O95164 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.72■□□□□ 0.27
UBL3O95164 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBL3O95164 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
UBL3O95164 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBL3O95164 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL3O95164 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UBL3O95164 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.71■□□□□ 0.27
UBL3O95164 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL3O95164 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBL3O95164 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL3O95164 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL3O95164 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
UBL3O95164 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
UBL3O95164 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.71■□□□□ 0.27
UBL3O95164 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.71■□□□□ 0.27
UBL3O95164 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
UBL3O95164 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.71■□□□□ 0.27
UBL3O95164 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
UBL3O95164 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL3O95164 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
UBL3O95164 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.71■□□□□ 0.27
UBL3O95164 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.71■□□□□ 0.27
UBL3O95164 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
UBL3O95164 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBL3O95164 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL3O95164 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBL3O95164 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL3O95164 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBL3O95164 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
UBL3O95164 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBL3O95164 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.7■□□□□ 0.26
UBL3O95164 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL3O95164 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL3O95164 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL3O95164 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBL3O95164 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.7■□□□□ 0.26
UBL3O95164 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL3O95164 UNC93B2-201ENST00000285383 730 ntBASIC16.7■□□□□ 0.26
UBL3O95164 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBL3O95164 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.7■□□□□ 0.26
UBL3O95164 MESTP1-201ENST00000404287 994 ntBASIC16.7■□□□□ 0.26
UBL3O95164 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBL3O95164 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
UBL3O95164 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.7■□□□□ 0.26
UBL3O95164 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
UBL3O95164 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.7■□□□□ 0.26
UBL3O95164 AP000692.2-201ENST00000608391 879 ntBASIC16.7■□□□□ 0.26
UBL3O95164 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.7■□□□□ 0.26
UBL3O95164 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
UBL3O95164 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
UBL3O95164 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL3O95164 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.7■□□□□ 0.26
UBL3O95164 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBL3O95164 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL3O95164 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL3O95164 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.7■□□□□ 0.26
UBL3O95164 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.7■□□□□ 0.26
UBL3O95164 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.7■□□□□ 0.26
UBL3O95164 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.7■□□□□ 0.26
UBL3O95164 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
UBL3O95164 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL3O95164 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
UBL3O95164 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL3O95164 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL3O95164 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL3O95164 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBL3O95164 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL3O95164 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms