Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.86■□□□□ 0.61
USP1O94782 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
USP1O94782 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 AP000997.3-201ENST00000623333 2250 ntBASIC18.86■□□□□ 0.61
USP1O94782 AL499627.1-201ENST00000569373 2188 ntBASIC18.86■□□□□ 0.61
USP1O94782 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
USP1O94782 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.86■□□□□ 0.61
USP1O94782 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.86■□□□□ 0.61
USP1O94782 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP1O94782 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.85■□□□□ 0.61
USP1O94782 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
USP1O94782 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP1O94782 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP1O94782 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
USP1O94782 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.85■□□□□ 0.61
USP1O94782 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.85■□□□□ 0.61
USP1O94782 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.85■□□□□ 0.61
USP1O94782 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP1O94782 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
USP1O94782 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP1O94782 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
USP1O94782 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.85■□□□□ 0.61
USP1O94782 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP1O94782 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.85■□□□□ 0.61
USP1O94782 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.85■□□□□ 0.61
USP1O94782 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.85■□□□□ 0.61
USP1O94782 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.85■□□□□ 0.61
USP1O94782 MYC-208ENST00000641036 567 ntBASIC18.85■□□□□ 0.61
USP1O94782 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP1O94782 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP1O94782 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP1O94782 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP1O94782 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP1O94782 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP1O94782 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP1O94782 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 FSCN1P1-201ENST00000568912 1481 ntBASIC18.84■□□□□ 0.61
USP1O94782 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
USP1O94782 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 AL357033.4-201ENST00000617703 1807 ntBASIC18.84■□□□□ 0.61
USP1O94782 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.84■□□□□ 0.61
USP1O94782 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.84■□□□□ 0.61
USP1O94782 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
USP1O94782 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.84■□□□□ 0.61
USP1O94782 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.84■□□□□ 0.61
USP1O94782 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.84■□□□□ 0.61
USP1O94782 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
USP1O94782 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
USP1O94782 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.84■□□□□ 0.61
USP1O94782 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.84■□□□□ 0.61
USP1O94782 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.84■□□□□ 0.61
USP1O94782 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.84■□□□□ 0.61
USP1O94782 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.84■□□□□ 0.61
USP1O94782 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
USP1O94782 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP1O94782 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP1O94782 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
USP1O94782 KRT8P45-201ENST00000414328 1447 ntBASIC18.83■□□□□ 0.61
USP1O94782 AL135905.2-201ENST00000584934 1404 ntBASIC18.83■□□□□ 0.61
USP1O94782 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP1O94782 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP1O94782 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.83■□□□□ 0.61
USP1O94782 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
USP1O94782 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.83■□□□□ 0.61
USP1O94782 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP1O94782 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP1O94782 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
USP1O94782 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP1O94782 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
USP1O94782 MESTP1-201ENST00000404287 994 ntBASIC18.83■□□□□ 0.6
USP1O94782 UBE2SP1-201ENST00000450587 669 ntBASIC18.83■□□□□ 0.6
USP1O94782 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP1O94782 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.83■□□□□ 0.6
USP1O94782 AP000692.2-201ENST00000608391 879 ntBASIC18.83■□□□□ 0.6
USP1O94782 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.83■□□□□ 0.6
USP1O94782 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.83■□□□□ 0.6
USP1O94782 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
USP1O94782 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP1O94782 RCC2P3-201ENST00000418112 1537 ntBASIC18.83■□□□□ 0.6
USP1O94782 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms