Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
BEST1O76090 TNXA-203ENST00000507684 2038 ntBASIC19.53■□□□□ 0.72
BEST1O76090 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
BEST1O76090 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BEST1O76090 HBZP1-201ENST00000354915 429 ntBASIC19.53■□□□□ 0.72
BEST1O76090 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.53■□□□□ 0.72
BEST1O76090 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.53■□□□□ 0.72
BEST1O76090 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.53■□□□□ 0.72
BEST1O76090 AC034232.1-201ENST00000506026 1064 ntBASIC19.53■□□□□ 0.72
BEST1O76090 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.53■□□□□ 0.72
BEST1O76090 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.53■□□□□ 0.72
BEST1O76090 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
BEST1O76090 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.53■□□□□ 0.72
BEST1O76090 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BEST1O76090 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
BEST1O76090 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BEST1O76090 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BEST1O76090 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BEST1O76090 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
BEST1O76090 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BEST1O76090 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
BEST1O76090 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BEST1O76090 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
BEST1O76090 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
BEST1O76090 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
BEST1O76090 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BEST1O76090 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BEST1O76090 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
BEST1O76090 LINC01311-201ENST00000565162 1445 ntBASIC19.52■□□□□ 0.72
BEST1O76090 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BEST1O76090 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.52■□□□□ 0.72
BEST1O76090 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BEST1O76090 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BEST1O76090 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
BEST1O76090 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.52■□□□□ 0.72
BEST1O76090 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
BEST1O76090 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
BEST1O76090 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BEST1O76090 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.52■□□□□ 0.72
BEST1O76090 FAM86EP-206ENST00000510506 987 ntBASIC19.52■□□□□ 0.72
BEST1O76090 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.52■□□□□ 0.72
BEST1O76090 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.52■□□□□ 0.72
BEST1O76090 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.52■□□□□ 0.72
BEST1O76090 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.52■□□□□ 0.72
BEST1O76090 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.52■□□□□ 0.72
BEST1O76090 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
BEST1O76090 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BEST1O76090 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
BEST1O76090 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BEST1O76090 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BEST1O76090 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
BEST1O76090 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
BEST1O76090 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
BEST1O76090 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.52■□□□□ 0.71
BEST1O76090 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.52■□□□□ 0.71
BEST1O76090 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.51■□□□□ 0.71
BEST1O76090 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.51■□□□□ 0.71
BEST1O76090 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
BEST1O76090 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST1O76090 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST1O76090 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST1O76090 AC120498.9-201ENST00000339021 3867 ntBASIC19.51■□□□□ 0.71
BEST1O76090 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BEST1O76090 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.51■□□□□ 0.71
BEST1O76090 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST1O76090 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.51■□□□□ 0.71
BEST1O76090 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.51■□□□□ 0.71
BEST1O76090 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
BEST1O76090 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
BEST1O76090 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BEST1O76090 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BEST1O76090 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
BEST1O76090 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST1O76090 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST1O76090 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST1O76090 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.51■□□□□ 0.71
BEST1O76090 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BEST1O76090 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
BEST1O76090 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.5■□□□□ 0.71
BEST1O76090 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.5■□□□□ 0.71
BEST1O76090 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BEST1O76090 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
BEST1O76090 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BEST1O76090 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.5■□□□□ 0.71
BEST1O76090 VENTXP5-201ENST00000523979 775 ntBASIC19.5■□□□□ 0.71
BEST1O76090 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
BEST1O76090 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.5■□□□□ 0.71
BEST1O76090 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.5■□□□□ 0.71
BEST1O76090 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BEST1O76090 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.5■□□□□ 0.71
BEST1O76090 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
BEST1O76090 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
BEST1O76090 AL163051.1-201ENST00000569214 1512 ntBASIC19.5■□□□□ 0.71
BEST1O76090 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.5■□□□□ 0.71
BEST1O76090 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.5■□□□□ 0.71
BEST1O76090 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
BEST1O76090 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.49■□□□□ 0.71
BEST1O76090 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms