Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 AL596275.1-201ENST00000423464 877 ntBASIC18.68■□□□□ 0.58
GPC4O75487 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.68■□□□□ 0.58
GPC4O75487 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.68■□□□□ 0.58
GPC4O75487 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.68■□□□□ 0.58
GPC4O75487 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.68■□□□□ 0.58
GPC4O75487 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.68■□□□□ 0.58
GPC4O75487 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.68■□□□□ 0.58
GPC4O75487 AC079598.2-202ENST00000546624 1451 ntBASIC18.68■□□□□ 0.58
GPC4O75487 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.68■□□□□ 0.58
GPC4O75487 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.68■□□□□ 0.58
GPC4O75487 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.68■□□□□ 0.58
GPC4O75487 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GPC4O75487 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.68■□□□□ 0.58
GPC4O75487 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.67■□□□□ 0.58
GPC4O75487 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.67■□□□□ 0.58
GPC4O75487 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GPC4O75487 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
GPC4O75487 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
GPC4O75487 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.67■□□□□ 0.58
GPC4O75487 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
GPC4O75487 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.67■□□□□ 0.58
GPC4O75487 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.67■□□□□ 0.58
GPC4O75487 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GPC4O75487 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 AC005082.1-201ENST00000413042 2259 ntBASIC18.67■□□□□ 0.58
GPC4O75487 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.67■□□□□ 0.58
GPC4O75487 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.67■□□□□ 0.58
GPC4O75487 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC4O75487 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.67■□□□□ 0.58
GPC4O75487 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.66■□□□□ 0.58
GPC4O75487 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GPC4O75487 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 Z98044.1-201ENST00000632503 1764 ntBASIC18.66■□□□□ 0.58
GPC4O75487 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
GPC4O75487 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
GPC4O75487 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GPC4O75487 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.66■□□□□ 0.58
GPC4O75487 RBM17P1-201ENST00000453646 1190 ntBASIC18.66■□□□□ 0.58
GPC4O75487 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.66■□□□□ 0.58
GPC4O75487 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
GPC4O75487 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.66■□□□□ 0.58
GPC4O75487 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GPC4O75487 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 WIZP1-201ENST00000531444 2299 ntBASIC18.66■□□□□ 0.58
GPC4O75487 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC4O75487 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.66■□□□□ 0.58
GPC4O75487 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 AC090164.3-201ENST00000610780 2143 ntBASIC18.65■□□□□ 0.58
GPC4O75487 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.65■□□□□ 0.58
GPC4O75487 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GPC4O75487 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GPC4O75487 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
GPC4O75487 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms