Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC28A2O43868 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC28A2O43868 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SLC28A2O43868 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC28A2O43868 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC28A2O43868 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC28A2O43868 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC28A2O43868 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC28A2O43868 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 VENTXP5-201ENST00000523979 775 ntBASIC17.94■□□□□ 0.46
SLC28A2O43868 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC28A2O43868 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC28A2O43868 AC130371.2-201ENST00000619443 611 ntBASIC17.94■□□□□ 0.46
SLC28A2O43868 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.94■□□□□ 0.46
SLC28A2O43868 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC28A2O43868 AL031432.5-201ENST00000641059 760 ntBASIC17.94■□□□□ 0.46
SLC28A2O43868 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC28A2O43868 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SLC28A2O43868 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC28A2O43868 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC28A2O43868 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC28A2O43868 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC28A2O43868 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SLC28A2O43868 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC28A2O43868 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SLC28A2O43868 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SLC28A2O43868 AC011506.1-201ENST00000474329 610 ntBASIC17.93■□□□□ 0.46
SLC28A2O43868 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC28A2O43868 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.93■□□□□ 0.46
SLC28A2O43868 RN7SL510P-201ENST00000581311 263 ntBASIC17.93■□□□□ 0.46
SLC28A2O43868 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SLC28A2O43868 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC28A2O43868 AL445675.2-201ENST00000620291 557 ntBASIC17.93■□□□□ 0.46
SLC28A2O43868 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC28A2O43868 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC28A2O43868 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC28A2O43868 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC28A2O43868 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC28A2O43868 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
SLC28A2O43868 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC28A2O43868 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SLC28A2O43868 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SLC28A2O43868 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
SLC28A2O43868 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SLC28A2O43868 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC28A2O43868 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.92■□□□□ 0.46
SLC28A2O43868 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.92■□□□□ 0.46
SLC28A2O43868 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC28A2O43868 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC28A2O43868 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SLC28A2O43868 AC004263.2-201ENST00000617183 678 ntBASIC17.92■□□□□ 0.46
SLC28A2O43868 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC28A2O43868 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC28A2O43868 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC28A2O43868 AC006333.2-201ENST00000607957 2099 ntBASIC17.92■□□□□ 0.46
SLC28A2O43868 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC28A2O43868 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC28A2O43868 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
SLC28A2O43868 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC28A2O43868 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC28A2O43868 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC28A2O43868 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC28A2O43868 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms