Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMA5O15230 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMA5O15230 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMA5O15230 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.23■□□□□ 0.35
LAMA5O15230 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.23■□□□□ 0.35
LAMA5O15230 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.23■□□□□ 0.35
LAMA5O15230 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMA5O15230 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.23■□□□□ 0.35
LAMA5O15230 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.23■□□□□ 0.35
LAMA5O15230 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.23■□□□□ 0.35
LAMA5O15230 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMA5O15230 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.22■□□□□ 0.35
LAMA5O15230 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.22■□□□□ 0.35
LAMA5O15230 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA5O15230 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA5O15230 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.22■□□□□ 0.35
LAMA5O15230 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMA5O15230 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LAMA5O15230 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA5O15230 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA5O15230 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA5O15230 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA5O15230 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA5O15230 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LAMA5O15230 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LAMA5O15230 VENTXP7-201ENST00000475503 772 ntBASIC17.22■□□□□ 0.35
LAMA5O15230 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.22■□□□□ 0.35
LAMA5O15230 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
LAMA5O15230 MIR4469-201ENST00000583919 79 ntBASIC17.22■□□□□ 0.35
LAMA5O15230 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.22■□□□□ 0.35
LAMA5O15230 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA5O15230 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.22■□□□□ 0.35
LAMA5O15230 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMA5O15230 HLA-J-201ENST00000462773 1622 ntBASIC17.22■□□□□ 0.35
LAMA5O15230 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA5O15230 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA5O15230 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMA5O15230 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMA5O15230 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.22■□□□□ 0.35
LAMA5O15230 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMA5O15230 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA5O15230 AL512353.2-201ENST00000448759 1962 ntBASIC17.22■□□□□ 0.35
LAMA5O15230 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMA5O15230 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA5O15230 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.22■□□□□ 0.35
LAMA5O15230 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.21■□□□□ 0.35
LAMA5O15230 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.21■□□□□ 0.35
LAMA5O15230 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.21■□□□□ 0.35
LAMA5O15230 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMA5O15230 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.21■□□□□ 0.35
LAMA5O15230 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.21■□□□□ 0.35
LAMA5O15230 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.21■□□□□ 0.35
LAMA5O15230 AC114341.1-201ENST00000618070 349 ntBASIC17.21■□□□□ 0.35
LAMA5O15230 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
LAMA5O15230 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMA5O15230 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LAMA5O15230 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
LAMA5O15230 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.21■□□□□ 0.35
LAMA5O15230 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.21■□□□□ 0.35
LAMA5O15230 AC040169.1-201ENST00000565382 521 ntBASIC17.21■□□□□ 0.35
LAMA5O15230 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.21■□□□□ 0.35
LAMA5O15230 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMA5O15230 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LAMA5O15230 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LAMA5O15230 AL645939.2-201ENST00000427340 991 ntBASIC17.2■□□□□ 0.34
LAMA5O15230 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
LAMA5O15230 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMA5O15230 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMA5O15230 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMA5O15230 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMA5O15230 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
LAMA5O15230 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LAMA5O15230 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMA5O15230 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.2■□□□□ 0.34
LAMA5O15230 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LAMA5O15230 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.2■□□□□ 0.34
LAMA5O15230 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.2■□□□□ 0.34
LAMA5O15230 BCRP1-201ENST00000444246 691 ntBASIC17.2■□□□□ 0.34
LAMA5O15230 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.2■□□□□ 0.34
LAMA5O15230 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.2■□□□□ 0.34
LAMA5O15230 ALG1L5P-201ENST00000482043 771 ntBASIC17.2■□□□□ 0.34
LAMA5O15230 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.2■□□□□ 0.34
LAMA5O15230 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.2■□□□□ 0.34
LAMA5O15230 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMA5O15230 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMA5O15230 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LAMA5O15230 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.2■□□□□ 0.34
LAMA5O15230 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.2■□□□□ 0.34
LAMA5O15230 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LAMA5O15230 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LAMA5O15230 GUSBP12-201ENST00000513727 720 ntBASIC17.19■□□□□ 0.34
LAMA5O15230 UNC93B6-202ENST00000528242 690 ntBASIC17.19■□□□□ 0.34
LAMA5O15230 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.19■□□□□ 0.34
LAMA5O15230 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.19■□□□□ 0.34
LAMA5O15230 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LAMA5O15230 HOXB1-202ENST00000577092 1414 ntBASIC17.19■□□□□ 0.34
LAMA5O15230 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LAMA5O15230 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LAMA5O15230 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LAMA5O15230 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms