Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
SMAD9O15198 INGX-201ENST00000359239 846 ntBASIC16.91■□□□□ 0.3
SMAD9O15198 CCR12P-201ENST00000446203 998 ntBASIC16.91■□□□□ 0.3
SMAD9O15198 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.91■□□□□ 0.3
SMAD9O15198 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.91■□□□□ 0.3
SMAD9O15198 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.91■□□□□ 0.3
SMAD9O15198 AC145285.6-201ENST00000604632 637 ntBASIC16.91■□□□□ 0.3
SMAD9O15198 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.91■□□□□ 0.3
SMAD9O15198 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.91■□□□□ 0.3
SMAD9O15198 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.91■□□□□ 0.3
SMAD9O15198 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SMAD9O15198 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
SMAD9O15198 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.9■□□□□ 0.3
SMAD9O15198 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
SMAD9O15198 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.9■□□□□ 0.3
SMAD9O15198 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 AC092338.2-201ENST00000568827 1415 ntBASIC16.9■□□□□ 0.3
SMAD9O15198 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SMAD9O15198 AC211429.1-201ENST00000415277 523 ntBASIC16.9■□□□□ 0.3
SMAD9O15198 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.9■□□□□ 0.3
SMAD9O15198 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.9■□□□□ 0.3
SMAD9O15198 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.9■□□□□ 0.3
SMAD9O15198 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.9■□□□□ 0.3
SMAD9O15198 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.9■□□□□ 0.3
SMAD9O15198 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 AC012306.2-201ENST00000609350 630 ntBASIC16.9■□□□□ 0.3
SMAD9O15198 AC097493.4-201ENST00000641197 219 ntBASIC16.9■□□□□ 0.3
SMAD9O15198 AC116562.4-202ENST00000641738 218 ntBASIC16.9■□□□□ 0.3
SMAD9O15198 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SMAD9O15198 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.9■□□□□ 0.3
SMAD9O15198 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMAD9O15198 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SMAD9O15198 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SMAD9O15198 LETM1P2-201ENST00000597330 2178 ntBASIC16.89■□□□□ 0.3
SMAD9O15198 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SMAD9O15198 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SMAD9O15198 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.89■□□□□ 0.29
SMAD9O15198 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SMAD9O15198 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SMAD9O15198 AC007663.1-201ENST00000438948 1240 ntBASIC16.89■□□□□ 0.29
SMAD9O15198 TSPY17P-201ENST00000450329 467 ntBASIC16.89■□□□□ 0.29
SMAD9O15198 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.89■□□□□ 0.29
SMAD9O15198 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.89■□□□□ 0.29
SMAD9O15198 AL353719.1-201ENST00000566847 864 ntBASIC16.89■□□□□ 0.29
SMAD9O15198 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.89■□□□□ 0.29
SMAD9O15198 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.89■□□□□ 0.29
SMAD9O15198 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SMAD9O15198 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.89■□□□□ 0.29
SMAD9O15198 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMAD9O15198 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD9O15198 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD9O15198 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD9O15198 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD9O15198 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMAD9O15198 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SMAD9O15198 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms