Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC31.79■■■□□ 2.68
CUX2O14529 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC31.79■■■□□ 2.68
CUX2O14529 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CUX2O14529 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CUX2O14529 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
CUX2O14529 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC31.79■■■□□ 2.68
CUX2O14529 AC073314.1-201ENST00000568729 2216 ntBASIC31.79■■■□□ 2.68
CUX2O14529 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CUX2O14529 AC104417.2-201ENST00000562989 1793 ntBASIC31.78■■■□□ 2.68
CUX2O14529 TSEN15P1-201ENST00000423257 515 ntBASIC31.78■■■□□ 2.68
CUX2O14529 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC31.78■■■□□ 2.68
CUX2O14529 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
CUX2O14529 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CUX2O14529 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CUX2O14529 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CUX2O14529 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CUX2O14529 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CUX2O14529 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
CUX2O14529 AL512408.1-201ENST00000569378 2000 ntBASIC31.78■■■□□ 2.68
CUX2O14529 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CUX2O14529 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
CUX2O14529 CENPM-204ENST00000402420 688 ntTSL 5 BASIC31.78■■■□□ 2.68
CUX2O14529 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC31.78■■■□□ 2.68
CUX2O14529 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC31.78■■■□□ 2.68
CUX2O14529 MEIS3P1-201ENST00000495167 958 ntBASIC31.78■■■□□ 2.68
CUX2O14529 RNF34-208ENST00000555076 593 ntTSL 3 BASIC31.78■■■□□ 2.68
CUX2O14529 AC105339.3-201ENST00000560043 636 ntBASIC31.78■■■□□ 2.68
CUX2O14529 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC31.77■■■□□ 2.68
CUX2O14529 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
CUX2O14529 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC31.77■■■□□ 2.68
CUX2O14529 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
CUX2O14529 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC31.77■■■□□ 2.68
CUX2O14529 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 CD99-202ENST00000381180 530 ntTSL 2 BASIC31.77■■■□□ 2.68
CUX2O14529 BAD-202ENST00000394531 631 ntTSL 3 BASIC31.77■■■□□ 2.68
CUX2O14529 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC31.77■■■□□ 2.68
CUX2O14529 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC31.77■■■□□ 2.68
CUX2O14529 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 AC024563.2-201ENST00000603282 481 ntBASIC31.77■■■□□ 2.68
CUX2O14529 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CUX2O14529 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.68
CUX2O14529 AP002414.3-201ENST00000589352 1468 ntBASIC31.76■■■□□ 2.68
CUX2O14529 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
CUX2O14529 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CUX2O14529 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CUX2O14529 INIP-202ENST00000374236 874 ntTSL 2 BASIC31.76■■■□□ 2.67
CUX2O14529 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC31.76■■■□□ 2.67
CUX2O14529 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC31.76■■■□□ 2.67
CUX2O14529 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC31.76■■■□□ 2.67
CUX2O14529 AC093512.1-201ENST00000617969 520 ntBASIC31.76■■■□□ 2.67
CUX2O14529 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC31.75■■■□□ 2.67
CUX2O14529 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC31.75■■■□□ 2.67
CUX2O14529 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC31.75■■■□□ 2.67
CUX2O14529 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CUX2O14529 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CUX2O14529 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CUX2O14529 MKNK2P1-201ENST00000437526 628 ntBASIC31.75■■■□□ 2.67
CUX2O14529 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CUX2O14529 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC31.75■■■□□ 2.67
CUX2O14529 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC31.75■■■□□ 2.67
CUX2O14529 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC31.75■■■□□ 2.67
CUX2O14529 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CUX2O14529 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC31.75■■■□□ 2.67
CUX2O14529 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
CUX2O14529 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC31.75■■■□□ 2.67
CUX2O14529 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CUX2O14529 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
CUX2O14529 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CUX2O14529 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CUX2O14529 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CUX2O14529 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CUX2O14529 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC31.74■■■□□ 2.67
CUX2O14529 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC31.74■■■□□ 2.67
CUX2O14529 AC005498.2-205ENST00000593218 784 ntBASIC31.74■■■□□ 2.67
CUX2O14529 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CUX2O14529 C20orf181-201ENST00000623918 480 ntBASIC31.74■■■□□ 2.67
CUX2O14529 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC31.74■■■□□ 2.67
CUX2O14529 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CUX2O14529 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CUX2O14529 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
CUX2O14529 GAPDHP21-201ENST00000450301 1010 ntBASIC31.73■■■□□ 2.67
CUX2O14529 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC31.73■■■□□ 2.67
CUX2O14529 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC31.73■■■□□ 2.67
CUX2O14529 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CUX2O14529 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
CUX2O14529 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC31.73■■■□□ 2.67
CUX2O14529 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
CUX2O14529 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
CUX2O14529 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
CUX2O14529 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms