Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
TRIM38O00635 PCED1CP-201ENST00000419887 785 ntBASIC18.73■□□□□ 0.59
TRIM38O00635 HOMER2P1-201ENST00000455653 964 ntBASIC18.73■□□□□ 0.59
TRIM38O00635 AL359075.1-203ENST00000462729 1002 ntBASIC18.73■□□□□ 0.59
TRIM38O00635 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
TRIM38O00635 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM38O00635 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM38O00635 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.73■□□□□ 0.59
TRIM38O00635 AL121956.5-201ENST00000625261 221 ntBASIC18.73■□□□□ 0.59
TRIM38O00635 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM38O00635 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM38O00635 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM38O00635 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 KRT8P45-201ENST00000414328 1447 ntBASIC18.73■□□□□ 0.59
TRIM38O00635 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRIM38O00635 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM38O00635 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM38O00635 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRIM38O00635 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRIM38O00635 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRIM38O00635 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM38O00635 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM38O00635 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRIM38O00635 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRIM38O00635 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM38O00635 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM38O00635 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM38O00635 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM38O00635 AC009947.2-201ENST00000444014 672 ntBASIC18.72■□□□□ 0.59
TRIM38O00635 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM38O00635 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM38O00635 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
TRIM38O00635 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM38O00635 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM38O00635 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM38O00635 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM38O00635 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM38O00635 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM38O00635 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TRIM38O00635 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM38O00635 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM38O00635 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM38O00635 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM38O00635 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM38O00635 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM38O00635 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM38O00635 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRIM38O00635 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM38O00635 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM38O00635 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM38O00635 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM38O00635 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM38O00635 KRT18P56-201ENST00000507275 550 ntBASIC18.71■□□□□ 0.59
TRIM38O00635 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM38O00635 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM38O00635 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM38O00635 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM38O00635 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM38O00635 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM38O00635 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM38O00635 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM38O00635 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM38O00635 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 AC009113.1-201ENST00000570267 2443 ntBASIC18.71■□□□□ 0.59
TRIM38O00635 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM38O00635 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM38O00635 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM38O00635 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM38O00635 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms