Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SOX1O00570 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.77■□□□□ 0.76
SOX1O00570 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.77■□□□□ 0.76
SOX1O00570 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SOX1O00570 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.77■□□□□ 0.76
SOX1O00570 AC012645.4-201ENST00000610691 1061 ntBASIC19.77■□□□□ 0.76
SOX1O00570 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.77■□□□□ 0.76
SOX1O00570 AC107918.4-202ENST00000641623 219 ntBASIC19.77■□□□□ 0.76
SOX1O00570 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX1O00570 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.77■□□□□ 0.76
SOX1O00570 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.77■□□□□ 0.76
SOX1O00570 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
SOX1O00570 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SOX1O00570 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SOX1O00570 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOX1O00570 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX1O00570 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX1O00570 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SOX1O00570 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOX1O00570 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
SOX1O00570 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
SOX1O00570 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX1O00570 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX1O00570 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SOX1O00570 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.76■□□□□ 0.75
SOX1O00570 PRSS29P-201ENST00000440800 595 ntBASIC19.76■□□□□ 0.75
SOX1O00570 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX1O00570 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.76■□□□□ 0.75
SOX1O00570 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOX1O00570 AL078644.1-201ENST00000609881 752 ntBASIC19.76■□□□□ 0.75
SOX1O00570 C20orf181-201ENST00000623918 480 ntBASIC19.76■□□□□ 0.75
SOX1O00570 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX1O00570 KRT89P-201ENST00000620027 1478 ntBASIC19.75■□□□□ 0.75
SOX1O00570 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.75■□□□□ 0.75
SOX1O00570 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.75■□□□□ 0.75
SOX1O00570 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.75■□□□□ 0.75
SOX1O00570 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
SOX1O00570 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SOX1O00570 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.75■□□□□ 0.75
SOX1O00570 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SOX1O00570 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.75■□□□□ 0.75
SOX1O00570 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SOX1O00570 TSEN15P1-201ENST00000423257 515 ntBASIC19.75■□□□□ 0.75
SOX1O00570 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.75■□□□□ 0.75
SOX1O00570 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.75■□□□□ 0.75
SOX1O00570 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.75■□□□□ 0.75
SOX1O00570 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.75■□□□□ 0.75
SOX1O00570 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.75■□□□□ 0.75
SOX1O00570 AC005498.2-205ENST00000593218 784 ntBASIC19.75■□□□□ 0.75
SOX1O00570 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SOX1O00570 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SOX1O00570 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.75■□□□□ 0.75
SOX1O00570 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SOX1O00570 AC112777.1-201ENST00000540175 1423 ntBASIC19.75■□□□□ 0.75
SOX1O00570 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SOX1O00570 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.75■□□□□ 0.75
SOX1O00570 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SOX1O00570 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.74■□□□□ 0.75
SOX1O00570 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 GUSBP5-202ENST00000510805 1989 ntBASIC19.74■□□□□ 0.75
SOX1O00570 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.74■□□□□ 0.75
SOX1O00570 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 AC022494.1-201ENST00000466044 728 ntBASIC19.74■□□□□ 0.75
SOX1O00570 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.74■□□□□ 0.75
SOX1O00570 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.74■□□□□ 0.75
SOX1O00570 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.74■□□□□ 0.75
SOX1O00570 AL008721.1-201ENST00000609964 604 ntBASIC19.74■□□□□ 0.75
SOX1O00570 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.74■□□□□ 0.75
SOX1O00570 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
SOX1O00570 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.74■□□□□ 0.75
SOX1O00570 AC079834.2-201ENST00000609776 1949 ntBASIC19.74■□□□□ 0.75
SOX1O00570 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX1O00570 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SOX1O00570 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.73■□□□□ 0.75
SOX1O00570 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.73■□□□□ 0.75
SOX1O00570 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SOX1O00570 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 AL109659.2-201ENST00000606809 1674 ntBASIC19.73■□□□□ 0.75
SOX1O00570 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SOX1O00570 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.73■□□□□ 0.75
SOX1O00570 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SOX1O00570 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms