Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTCAO00442 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RTCAO00442 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTCAO00442 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTCAO00442 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.77■□□□□ 0.43
RTCAO00442 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTCAO00442 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTCAO00442 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RTCAO00442 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTCAO00442 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTCAO00442 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RTCAO00442 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTCAO00442 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RTCAO00442 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTCAO00442 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTCAO00442 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTCAO00442 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RTCAO00442 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTCAO00442 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.76■□□□□ 0.43
RTCAO00442 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
RTCAO00442 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTCAO00442 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.76■□□□□ 0.43
RTCAO00442 ECEL1P2-202ENST00000465689 757 ntBASIC17.76■□□□□ 0.43
RTCAO00442 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTCAO00442 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
RTCAO00442 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
RTCAO00442 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTCAO00442 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.76■□□□□ 0.43
RTCAO00442 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RTCAO00442 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTCAO00442 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTCAO00442 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTCAO00442 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTCAO00442 AC099343.3-201ENST00000605834 2503 ntBASIC17.75■□□□□ 0.43
RTCAO00442 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.75■□□□□ 0.43
RTCAO00442 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTCAO00442 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.75■□□□□ 0.43
RTCAO00442 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTCAO00442 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.75■□□□□ 0.43
RTCAO00442 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTCAO00442 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.75■□□□□ 0.43
RTCAO00442 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.75■□□□□ 0.43
RTCAO00442 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.75■□□□□ 0.43
RTCAO00442 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.75■□□□□ 0.43
RTCAO00442 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.75■□□□□ 0.43
RTCAO00442 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.75■□□□□ 0.43
RTCAO00442 MIR3180-5-201ENST00000583743 153 ntBASIC17.75■□□□□ 0.43
RTCAO00442 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
RTCAO00442 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.75■□□□□ 0.43
RTCAO00442 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.75■□□□□ 0.43
RTCAO00442 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.75■□□□□ 0.43
RTCAO00442 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTCAO00442 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RTCAO00442 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.75■□□□□ 0.43
RTCAO00442 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RTCAO00442 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RTCAO00442 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RTCAO00442 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.74■□□□□ 0.43
RTCAO00442 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 MIR564-202ENST00000385049 94 ntBASIC17.74■□□□□ 0.43
RTCAO00442 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.74■□□□□ 0.43
RTCAO00442 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.74■□□□□ 0.43
RTCAO00442 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 CR769767.2-201ENST00000622735 460 ntBASIC17.74■□□□□ 0.43
RTCAO00442 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.74■□□□□ 0.43
RTCAO00442 LINC01568-207ENST00000641790 1380 ntBASIC17.74■□□□□ 0.43
RTCAO00442 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RTCAO00442 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.74■□□□□ 0.43
RTCAO00442 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.74■□□□□ 0.43
RTCAO00442 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.74■□□□□ 0.43
RTCAO00442 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RTCAO00442 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTCAO00442 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RTCAO00442 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.73■□□□□ 0.43
RTCAO00442 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.73■□□□□ 0.43
RTCAO00442 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 KRT8P45-201ENST00000414328 1447 ntBASIC17.73■□□□□ 0.43
RTCAO00442 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.73■□□□□ 0.43
RTCAO00442 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.73■□□□□ 0.43
RTCAO00442 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RTCAO00442 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms