Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 GPX1P1-201ENST00000388829 606 ntBASIC13.63□□□□□ -0.23
SMKR1H3BMG3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMKR1H3BMG3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 AC005837.3-201ENST00000612163 286 ntBASIC13.62□□□□□ -0.23
SMKR1H3BMG3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 AC124067.4-201ENST00000519691 2379 ntBASIC13.62□□□□□ -0.23
SMKR1H3BMG3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 AC010980.2-201ENST00000587099 1412 ntBASIC13.62□□□□□ -0.23
SMKR1H3BMG3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMKR1H3BMG3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SMKR1H3BMG3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms