Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AL512604.3-201ENST00000569583 964 ntBASIC16.48■□□□□ 0.23
NPIPB4C9JG80 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 AL163051.1-201ENST00000569214 1512 ntBASIC16.48■□□□□ 0.23
NPIPB4C9JG80 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.48■□□□□ 0.23
NPIPB4C9JG80 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 MIR149-201ENST00000384879 89 ntBASIC16.47■□□□□ 0.23
NPIPB4C9JG80 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 AC093677.2-201ENST00000600169 1863 ntBASIC16.47■□□□□ 0.23
NPIPB4C9JG80 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPB4C9JG80 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 KRT18P23-201ENST00000435622 1283 ntBASIC16.46■□□□□ 0.23
NPIPB4C9JG80 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.46■□□□□ 0.23
NPIPB4C9JG80 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPIPB4C9JG80 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPIPB4C9JG80 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NPIPB4C9JG80 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 AC104390.1-201ENST00000555663 520 ntBASIC16.45■□□□□ 0.22
NPIPB4C9JG80 NAPSB-206ENST00000562112 1266 ntBASIC16.45■□□□□ 0.22
NPIPB4C9JG80 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 AC009102.3-201ENST00000623118 1491 ntBASIC16.45■□□□□ 0.22
NPIPB4C9JG80 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPB4C9JG80 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms