Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00473A8K010 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00473A8K010 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00473A8K010 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
LINC00473A8K010 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
LINC00473A8K010 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.17■□□□□ 0.02
LINC00473A8K010 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LINC00473A8K010 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LINC00473A8K010 PCDHB18P-201ENST00000524813 2368 ntBASIC15.17■□□□□ 0.02
LINC00473A8K010 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00473A8K010 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 MESTP1-201ENST00000404287 994 ntBASIC15.17■□□□□ 0.02
LINC00473A8K010 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LINC00473A8K010 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00473A8K010 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LINC00473A8K010 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC00473A8K010 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00473A8K010 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00473A8K010 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00473A8K010 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00473A8K010 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LINC00473A8K010 AC008556.1-201ENST00000610908 2040 ntBASIC15.16■□□□□ 0.02
LINC00473A8K010 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00473A8K010 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00473A8K010 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LINC00473A8K010 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00473A8K010 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00473A8K010 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00473A8K010 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00473A8K010 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00473A8K010 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.16■□□□□ 0.02
LINC00473A8K010 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LINC00473A8K010 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00473A8K010 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00473A8K010 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC00473A8K010 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00473A8K010 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00473A8K010 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LINC00473A8K010 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
LINC00473A8K010 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC00473A8K010 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.15■□□□□ 0.02
LINC00473A8K010 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 FAM197Y1-201ENST00000421178 764 ntBASIC15.15■□□□□ 0.02
LINC00473A8K010 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.15■□□□□ 0.02
LINC00473A8K010 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC00473A8K010 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC00473A8K010 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00473A8K010 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00473A8K010 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00473A8K010 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00473A8K010 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC00473A8K010 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.15■□□□□ 0.02
LINC00473A8K010 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00473A8K010 AP000692.2-201ENST00000608391 879 ntBASIC15.15■□□□□ 0.02
LINC00473A8K010 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 AC008622.2-201ENST00000617006 1229 ntBASIC15.15■□□□□ 0.02
LINC00473A8K010 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC00473A8K010 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC00473A8K010 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC00473A8K010 AL109659.2-201ENST00000606809 1674 ntBASIC15.15■□□□□ 0.02
LINC00473A8K010 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms