Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 PRSS44-201ENST00000515154 1146 ntBASIC18.64■□□□□ 0.57
CCDC189A1A4V9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 KRT18P6-201ENST00000555540 1265 ntBASIC18.64■□□□□ 0.57
CCDC189A1A4V9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 AC110285.5-201ENST00000611501 352 ntBASIC18.64■□□□□ 0.57
CCDC189A1A4V9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CCDC189A1A4V9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 KRASP1-201ENST00000407852 552 ntBASIC18.63■□□□□ 0.57
CCDC189A1A4V9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 RN7SL471P-201ENST00000580476 299 ntBASIC18.63■□□□□ 0.57
CCDC189A1A4V9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 AC124016.1-201ENST00000609552 612 ntBASIC18.63■□□□□ 0.57
CCDC189A1A4V9 AC131212.4-201ENST00000623606 975 ntBASIC18.63■□□□□ 0.57
CCDC189A1A4V9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC189A1A4V9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC189A1A4V9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC189A1A4V9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms