Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUXBA0A1W2PPF3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 KRT8P3-201ENST00000519669 1449 ntBASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 AL121832.2-201ENST00000610979 668 ntBASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
DUXBA0A1W2PPF3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.21■□□□□ 0.02
DUXBA0A1W2PPF3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DUXBA0A1W2PPF3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 AC091874.3-201ENST00000512672 1195 ntBASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 C1QL1P1-201ENST00000568105 661 ntBASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.2■□□□□ 0.02
DUXBA0A1W2PPF3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 KRT8P41-201ENST00000533985 1514 ntBASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 AC060766.5-201ENST00000590539 871 ntBASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DUXBA0A1W2PPF3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms