Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 AC008687.6-201ENST00000596318 630 ntBASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 AC073111.5-205ENST00000641717 521 ntBASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 AL357033.4-201ENST00000617703 1807 ntBASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 AC139713.2-201ENST00000641328 2723 ntBASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 POU5F1P3-201ENST00000428824 1078 ntBASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 AC097658.1-201ENST00000475555 843 ntBASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 REXO1L9P-201ENST00000604264 2108 ntBASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 AC080038.1-201ENST00000611274 1154 ntBASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV27A0A0K0K1C4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 MIR663A-201ENST00000385250 93 ntBASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV27A0A0K0K1C4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV27A0A0K0K1C4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.15□□□□□ -0.3
TRBV27A0A0K0K1C4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV27A0A0K0K1C4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV27A0A0K0K1C4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV27A0A0K0K1C4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRBV27A0A0K0K1C4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.15□□□□□ -0.3
TRBV27A0A0K0K1C4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms