Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 AL049812.1-201ENST00000432563 2267 ntBASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC112497.1-201ENST00000624824 639 ntBASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IGHV4-28A0A0C4DH34 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IGHV4-28A0A0C4DH34 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 MIR564-202ENST00000385049 94 ntBASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 KRT18P23-201ENST00000435622 1283 ntBASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 KRT18P38-201ENST00000449496 1282 ntBASIC13.43□□□□□ -0.26
IGHV4-28A0A0C4DH34 AL671277.2-201ENST00000458060 996 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms