Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 KRT16P1-201ENST00000399124 1418 ntBASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 RCC2P6-201ENST00000526625 1557 ntBASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV12-3A0A0B4J271 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 AC004951.3-201ENST00000418645 1148 ntBASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 AL353708.3-201ENST00000610272 989 ntBASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAV12-3A0A0B4J271 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 HEIH-201ENST00000623091 1652 ntBASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-3A0A0B4J271 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms