Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 TSPY6P-201ENST00000448518 926 ntBASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 AC020916.1-201ENST00000587762 1774 ntBASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRAV5A0A0B4J249 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 KRT8P41-201ENST00000533985 1514 ntBASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 AC134043.2-201ENST00000624206 2238 ntBASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 AC098934.4-201ENST00000564127 592 ntBASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 AC083880.1-201ENST00000608266 535 ntBASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 AC068587.9-201ENST00000641814 219 ntBASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV5A0A0B4J249 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms