Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 IGHV3-47-201ENST00000425060 335 ntBASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 GPALPP1-207ENST00000611650 899 ntBASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC187A0A096LP49 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 PCDHAC2-203ENST00000615316 3011 ntBASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC187A0A096LP49 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 RN7SL606P-201ENST00000472779 293 ntBASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC187A0A096LP49 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 MRPL3P1-201ENST00000400109 1033 ntBASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 SAPCD2P3-201ENST00000455031 850 ntBASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 AC004263.2-201ENST00000617183 678 ntBASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 KRT89P-201ENST00000620027 1478 ntBASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 NSUN5P1-202ENST00000421140 1535 ntBASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 NSUN5P2-203ENST00000457352 1529 ntBASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms