Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.3■■□□□ 1
CLIC4Q9Y696 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLIC4Q9Y696 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CLIC4Q9Y696 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLIC4Q9Y696 AC135776.1-201ENST00000319817 2481 ntBASIC21.3■■□□□ 1
CLIC4Q9Y696 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLIC4Q9Y696 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.29■■□□□ 1
CLIC4Q9Y696 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.29■■□□□ 1
CLIC4Q9Y696 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.29■■□□□ 1
CLIC4Q9Y696 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.29■■□□□ 1
CLIC4Q9Y696 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.29■■□□□ 1
CLIC4Q9Y696 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.29■■□□□ 1
CLIC4Q9Y696 DGCR10-201ENST00000609839 495 ntBASIC21.29■■□□□ 1
CLIC4Q9Y696 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.29■■□□□ 1
CLIC4Q9Y696 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.29■■□□□ 1
CLIC4Q9Y696 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.29■■□□□ 1
CLIC4Q9Y696 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CLIC4Q9Y696 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.29■■□□□ 1
CLIC4Q9Y696 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CLIC4Q9Y696 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC4Q9Y696 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.29■■□□□ 1
CLIC4Q9Y696 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.28■■□□□ 1
CLIC4Q9Y696 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CLIC4Q9Y696 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.28■■□□□ 1
CLIC4Q9Y696 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CLIC4Q9Y696 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.28■■□□□ 1
CLIC4Q9Y696 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.28■■□□□ 1
CLIC4Q9Y696 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.28■■□□□ 1
CLIC4Q9Y696 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.28■■□□□ 1
CLIC4Q9Y696 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.28■■□□□ 1
CLIC4Q9Y696 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.28■■□□□ 1
CLIC4Q9Y696 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CLIC4Q9Y696 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC4Q9Y696 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.28■■□□□ 1
CLIC4Q9Y696 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.28■■□□□ 1
CLIC4Q9Y696 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLIC4Q9Y696 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLIC4Q9Y696 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.27■■□□□ 1
CLIC4Q9Y696 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.27■■□□□ 1
CLIC4Q9Y696 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.27■■□□□ 1
CLIC4Q9Y696 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CLIC4Q9Y696 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLIC4Q9Y696 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.27■■□□□ 1
CLIC4Q9Y696 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CLIC4Q9Y696 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLIC4Q9Y696 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLIC4Q9Y696 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.27■■□□□ 1
CLIC4Q9Y696 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.27■■□□□ 1
CLIC4Q9Y696 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.27■■□□□ 1
CLIC4Q9Y696 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CLIC4Q9Y696 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
CLIC4Q9Y696 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLIC4Q9Y696 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.27■□□□□ 0.99
CLIC4Q9Y696 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CLIC4Q9Y696 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLIC4Q9Y696 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLIC4Q9Y696 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLIC4Q9Y696 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 CRYGFP-201ENST00000418459 633 ntBASIC21.26■□□□□ 0.99
CLIC4Q9Y696 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 AC026471.5-201ENST00000615068 467 ntBASIC21.26■□□□□ 0.99
CLIC4Q9Y696 MYC-208ENST00000641036 567 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms