Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.85■□□□□ 0.93
COL4A3BPQ9Y5P4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COL4A3BPQ9Y5P4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL4A3BPQ9Y5P4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.85■□□□□ 0.93
COL4A3BPQ9Y5P4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL4A3BPQ9Y5P4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COL4A3BPQ9Y5P4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.85■□□□□ 0.93
COL4A3BPQ9Y5P4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL4A3BPQ9Y5P4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 TSPY5P-201ENST00000426936 936 ntBASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 AC009947.2-201ENST00000444014 672 ntBASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 CR769767.2-201ENST00000622735 460 ntBASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 AL023973.1-201ENST00000624619 620 ntBASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 AL031432.5-201ENST00000641059 760 ntBASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL4A3BPQ9Y5P4 RCC2P3-201ENST00000418112 1537 ntBASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 Z98044.1-201ENST00000632503 1764 ntBASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 AL023284.2-201ENST00000405850 579 ntBASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
COL4A3BPQ9Y5P4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL4A3BPQ9Y5P4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL4A3BPQ9Y5P4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
COL4A3BPQ9Y5P4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL4A3BPQ9Y5P4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL4A3BPQ9Y5P4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.83■□□□□ 0.92
COL4A3BPQ9Y5P4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL4A3BPQ9Y5P4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 LINC01238-205ENST00000567549 1107 ntBASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 AC140113.3-201ENST00000605663 199 ntBASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
COL4A3BPQ9Y5P4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 AL109659.2-201ENST00000606809 1674 ntBASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 AP000523.1-201ENST00000398242 1049 ntBASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 FAM8A6P-201ENST00000407496 1135 ntBASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.81■□□□□ 0.92
COL4A3BPQ9Y5P4 AL441883.1-201ENST00000566170 1045 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms