Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 AC005332.8-201ENST00000622750 2735 ntBASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA3Q9Y5H0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 AC112907.2-201ENST00000448639 330 ntBASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 VENTXP5-201ENST00000523979 775 ntBASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 ZNF444P1-201ENST00000559497 298 ntBASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 TREX1-205ENST00000625293 1783 ntBASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA3Q9Y5H0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
PCDHGA3Q9Y5H0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA3Q9Y5H0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA3Q9Y5H0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHGA3Q9Y5H0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA3Q9Y5H0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA3Q9Y5H0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PCDHGA3Q9Y5H0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.08■□□□□ 0.49
PCDHGA3Q9Y5H0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA3Q9Y5H0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA3Q9Y5H0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 GCSHP2-201ENST00000560971 527 ntBASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 AC069148.1-201ENST00000608741 768 ntBASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 HYMAI.1-201ENST00000620949 238 ntBASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA3Q9Y5H0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms