Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 DUX4L16-201ENST00000555130 1264 ntBASIC17.63■□□□□ 0.41
AP4S1Q9Y587 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 AC084018.2-201ENST00000613093 2607 ntBASIC17.62■□□□□ 0.41
AP4S1Q9Y587 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 AC005837.3-201ENST00000612163 286 ntBASIC17.62■□□□□ 0.41
AP4S1Q9Y587 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP4S1Q9Y587 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 AC124283.5-201ENST00000624661 1809 ntBASIC17.61■□□□□ 0.41
AP4S1Q9Y587 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 OR10C1-204ENST00000622521 1039 ntBASIC17.61■□□□□ 0.41
AP4S1Q9Y587 MYC-208ENST00000641036 567 ntBASIC17.61■□□□□ 0.41
AP4S1Q9Y587 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.61■□□□□ 0.41
AP4S1Q9Y587 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP4S1Q9Y587 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 REXO1L9P-201ENST00000604264 2108 ntBASIC17.6■□□□□ 0.41
AP4S1Q9Y587 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP4S1Q9Y587 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms