Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 FAM86EP-206ENST00000510506 987 ntBASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPIPA1Q9UND3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 IER3-202ENST00000376377 1350 ntBASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 KRT18P38-201ENST00000449496 1282 ntBASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 AC008622.2-201ENST00000617006 1229 ntBASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPIPA1Q9UND3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 AL161938.1-201ENST00000569833 2180 ntBASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPIPA1Q9UND3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPIPA1Q9UND3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms