Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 Z99916.2-201ENST00000604037 246 ntBASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 AC008556.1-201ENST00000610908 2040 ntBASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VPS29Q9UBQ0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 AC007613.1-201ENST00000572811 2597 ntBASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 CA15P1-201ENST00000481698 905 ntBASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 AC026471.5-201ENST00000615068 467 ntBASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS29Q9UBQ0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS29Q9UBQ0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.86■□□□□ 0.45
VPS29Q9UBQ0 AL354751.1-201ENST00000412768 1863 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms