Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 AL591684.3-201ENST00000605187 298 ntBASIC18.47■□□□□ 0.55
NCDNQ9UBB6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCDNQ9UBB6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 AC008608.2-201ENST00000606089 416 ntBASIC18.46■□□□□ 0.55
NCDNQ9UBB6 MIR7706-201ENST00000613747 67 ntBASIC18.46■□□□□ 0.55
NCDNQ9UBB6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCDNQ9UBB6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
NCDNQ9UBB6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.46■□□□□ 0.54
NCDNQ9UBB6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 POM121L3P-201ENST00000419331 1163 ntBASIC18.45■□□□□ 0.54
NCDNQ9UBB6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 MIR3687-2-201ENST00000577708 61 ntBASIC18.45■□□□□ 0.54
NCDNQ9UBB6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 MIR3687-1-201ENST00000614492 61 ntBASIC18.45■□□□□ 0.54
NCDNQ9UBB6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCDNQ9UBB6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.44■□□□□ 0.54
NCDNQ9UBB6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 AC011840.4-201ENST00000578471 627 ntBASIC18.44■□□□□ 0.54
NCDNQ9UBB6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 AL049840.3-201ENST00000602669 611 ntBASIC18.44■□□□□ 0.54
NCDNQ9UBB6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms