Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VAPAQ9P0L0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
VAPAQ9P0L0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 AL355802.2-201ENST00000402069 882 ntBASIC17.65■□□□□ 0.42
VAPAQ9P0L0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 AC239809.2-201ENST00000415381 517 ntBASIC17.65■□□□□ 0.42
VAPAQ9P0L0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 AC004980.1-204ENST00000429707 299 ntBASIC17.65■□□□□ 0.42
VAPAQ9P0L0 AC026366.1-201ENST00000488803 879 ntBASIC17.65■□□□□ 0.42
VAPAQ9P0L0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VAPAQ9P0L0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VAPAQ9P0L0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VAPAQ9P0L0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VAPAQ9P0L0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.64■□□□□ 0.42
VAPAQ9P0L0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 AC131212.4-201ENST00000623606 975 ntBASIC17.64■□□□□ 0.41
VAPAQ9P0L0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VAPAQ9P0L0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.63■□□□□ 0.41
VAPAQ9P0L0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 RNA5SP413-201ENST00000516373 109 ntBASIC17.63■□□□□ 0.41
VAPAQ9P0L0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.63■□□□□ 0.41
VAPAQ9P0L0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VAPAQ9P0L0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms