Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 HTR7P1-201ENST00000538670 1336 ntBASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 AC073648.6-201ENST00000641589 218 ntBASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 AL031985.4-201ENST00000642138 673 ntBASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
THUMPD1Q9NXG2 KRT16P1-201ENST00000399124 1418 ntBASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 AC112777.1-201ENST00000540175 1423 ntBASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 AC006058.3-201ENST00000606217 1069 ntBASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 AP000997.3-201ENST00000623333 2250 ntBASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
THUMPD1Q9NXG2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 AC126763.1-201ENST00000552015 2118 ntBASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.54■□□□□ 0.4
THUMPD1Q9NXG2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms