Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 KRT18P22-201ENST00000402024 1347 ntBASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN4Q9NRR5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 INGX-201ENST00000359239 846 ntBASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 CR769767.2-201ENST00000622735 460 ntBASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 AC036111.1-201ENST00000533973 1582 ntBASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.13■□□□□ 0.33
UBQLN4Q9NRR5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 AP000593.1-201ENST00000393668 712 ntBASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 HMGA1P5-201ENST00000412453 271 ntBASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 ECEL1P2-202ENST00000465689 757 ntBASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 AC073912.3-201ENST00000624414 853 ntBASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN4Q9NRR5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 AL499627.1-201ENST00000569373 2188 ntBASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 AC145285.6-201ENST00000604632 637 ntBASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 FAM87A-204ENST00000613235 858 ntBASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 KRT8P7-201ENST00000533003 1432 ntBASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN4Q9NRR5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN4Q9NRR5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms