Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 RPS2P55-201ENST00000397318 883 ntBASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 FAM197Y1-201ENST00000421178 764 ntBASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 AC107956.1-201ENST00000494359 873 ntBASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTPS2Q9NRF8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 AL133373.2-201ENST00000623187 2828 ntBASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 AL031985.4-201ENST00000642138 673 ntBASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 FZD10-202ENST00000539839 3282 ntBASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTPS2Q9NRF8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 AC012618.2-201ENST00000428058 849 ntBASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 CD177P1-201ENST00000606252 935 ntBASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 AL499627.1-201ENST00000569373 2188 ntBASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 LETM1P2-201ENST00000597330 2178 ntBASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTPS2Q9NRF8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms