Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 AL136038.4-201ENST00000603606 1261 ntBASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 AC005332.1-201ENST00000577698 1310 ntBASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G1Q9HCP0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G1Q9HCP0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 VENTXP5-201ENST00000523979 775 ntBASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 AC116407.4-201ENST00000623319 1061 ntBASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 AL358472.4-201ENST00000633140 710 ntBASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G1Q9HCP0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 MIR149-201ENST00000384879 89 ntBASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 PCED1CP-201ENST00000419887 785 ntBASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 AC091076.1-201ENST00000610741 619 ntBASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G1Q9HCP0 AC098818.2-201ENST00000564925 2320 ntBASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 MIR662-201ENST00000384847 95 ntBASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 AP000550.4-202ENST00000639755 178 ntBASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1G1Q9HCP0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms