Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC010326.4-201ENST00000604665 891 ntBASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SCAF1Q9H7N4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 AL445675.2-201ENST00000620291 557 ntBASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC27.73■■■□□ 2.03
SCAF1Q9H7N4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 AC079776.4-201ENST00000511039 504 ntBASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 PRSS44-201ENST00000515154 1146 ntBASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 AC135050.7-201ENST00000624508 2218 ntBASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 AC011484.1-201ENST00000377652 1995 ntBASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC27.72■■■□□ 2.03
SCAF1Q9H7N4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 AC007663.1-201ENST00000438948 1240 ntBASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC27.71■■■□□ 2.03
SCAF1Q9H7N4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SCAF1Q9H7N4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC27.7■■■□□ 2.03
SCAF1Q9H7N4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC27.7■■■□□ 2.03
SCAF1Q9H7N4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC27.7■■■□□ 2.03
SCAF1Q9H7N4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
SCAF1Q9H7N4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
SCAF1Q9H7N4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC27.7■■■□□ 2.03
SCAF1Q9H7N4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
SCAF1Q9H7N4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
SCAF1Q9H7N4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC27.7■■■□□ 2.02
SCAF1Q9H7N4 Z82202.1-201ENST00000623446 1880 ntBASIC27.7■■■□□ 2.02
SCAF1Q9H7N4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC27.7■■■□□ 2.02
SCAF1Q9H7N4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SCAF1Q9H7N4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC27.7■■■□□ 2.02
SCAF1Q9H7N4 AC121338.2-201ENST00000622535 1744 ntBASIC27.7■■■□□ 2.02
SCAF1Q9H7N4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 AC008622.2-201ENST00000617006 1229 ntBASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 FP700111.2-201ENST00000619190 1892 ntBASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SCAF1Q9H7N4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms