Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 AL450487.1-201ENST00000426799 995 ntBASIC21.7■■□□□ 1.06
SH2D4AQ9H788 PVRIG2P-201ENST00000435460 978 ntBASIC21.7■■□□□ 1.06
SH2D4AQ9H788 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 AC092119.3-201ENST00000612618 583 ntBASIC21.7■■□□□ 1.06
SH2D4AQ9H788 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.7■■□□□ 1.06
SH2D4AQ9H788 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 AC092329.2-201ENST00000598402 547 ntBASIC21.69■■□□□ 1.06
SH2D4AQ9H788 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 AC016734.2-201ENST00000624325 1377 ntBASIC21.69■■□□□ 1.06
SH2D4AQ9H788 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.69■■□□□ 1.06
SH2D4AQ9H788 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SH2D4AQ9H788 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.68■■□□□ 1.06
SH2D4AQ9H788 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 AC116562.4-201ENST00000641316 2276 ntBASIC21.67■■□□□ 1.06
SH2D4AQ9H788 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 CHCHD2P8-201ENST00000429873 447 ntBASIC21.67■■□□□ 1.06
SH2D4AQ9H788 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH2D4AQ9H788 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SH2D4AQ9H788 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH2D4AQ9H788 HEIH-201ENST00000623091 1652 ntBASIC21.66■■□□□ 1.06
SH2D4AQ9H788 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH2D4AQ9H788 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms